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2024-12-20Add todo note for writing rqtl file.Alexander_Kabui
2024-12-20fix: Pylint fixes.Alexander_Kabui
2024-12-20feat: Enable streaming for output.Alexander_Kabui
2024-12-17feat: Init integrate streaming functionality to rqtl1.Alexander_Kabui
2024-12-07Check whether genofile/phenofile exist separately.Munyoki Kilyungi
2024-12-04Temp disable with for test Popen processes.Alexander_Kabui
2024-12-04refactor: make pylint fixes.Alexander_Kabui
2024-11-28feat: define general endpoint for streaming stdout using unique identifier.Alexander_Kabui
2024-11-27feat: return run id for compute and streaming api's.Alexander_Kabui
2024-11-26feat: Implement reading from file functionalityAlexander_Kabui
2024-11-22feat: return pointer position from where the file was last read.Alexander_Kabui
2024-11-22feat: Add new endpoint to read stdout given a file identifier.Alexander_Kabui
2024-11-22feat: implement ednpoint for computing qtl using rqtl2.Alexander_Kabui
2024-10-18refactor: replace gn3.auth.db with gn3.sqlite_db_utils and drop all refs to g...John Nduli
2024-10-18refactor: move definition of auth errs and remove auth cli utilsJohn Nduli
2024-10-15Lint: Fix linting errors.Frederick Muriuki Muriithi
2024-10-15Pass in correct file path.Frederick Muriuki Muriithi
2024-10-15fix: use require_token to validate gn3 apisJohn Nduli
2024-10-14Add end-point for fetching NCBI metadata.Munyoki Kilyungi
2024-09-30chore: pylint code fixJohn Nduli
2024-09-30feat: rollback mysql transaction when rdf insert failsJohn Nduli
2024-09-27Bug: Use absolute path in place of relative pathFrederick Muriuki Muriithi
2024-09-19Remove extraneous keyword.Munyoki Kilyungi
2024-09-18Pass in insert_dict instead of payload in "get_wiki_entries".Munyoki Kilyungi
2024-09-18Pass in the createtime as an arg when inserting into RDF graph.Munyoki Kilyungi
2024-09-18Get the next versionId from SQL.Munyoki Kilyungi
2024-09-18Update "POST /wiki/comment_id/edit" to have RDF edits.Munyoki Kilyungi
2024-09-18Fix typo.Munyoki Kilyungi
2024-09-17Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki.Munyoki Kilyungi
2024-09-17feat: require auth for edit api callJohn Nduli
2024-09-12Fix pylint errors.Munyoki Kilyungi
2024-09-12feat: pick results from sqlite3 if they were storedJohn Nduli
2024-09-12Initialise the package to ensure setuptools finds it.Frederick Muriuki Muriithi
2024-09-12Make sure dir exists before running R/qtlPjotr Prins
2024-09-12Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes fromPjotr Prins
2024-09-12rqtl_wrapper: minor fixesPjotr Prins
2024-09-12Make sure TMPDIR directories exist!Pjotr Prins
2024-09-12Move assert_paths_exist into fs_helpersPjotr Prins
2024-09-12Change behavior of do_paths_exist to actually throw useful errorPjotr Prins
2024-09-12Getting Rqtl to run on fallbackPjotr Prins
2024-09-12Move assert_paths_exist into fs_helpersPjotr Prins
2024-09-12Change behavior of do_paths_exist to actually throw useful errorPjotr Prins
2024-09-12Make the gnqa search endpoint a get request.Alexander_Kabui
2024-09-11Replace format-string with f-strings.Munyoki Kilyungi
2024-09-11Run python-black against file.Munyoki Kilyungi
2024-09-06Modify endpoint to use query string.Alexander_Kabui
2024-09-06Merge pull request #188 from genenetwork/chores/merge-gnqa-apiAlexander Kabui
2024-09-05Fix type error.Munyoki Kilyungi
2024-09-05Use the correct header to request json-ld data.Munyoki Kilyungi
2024-09-05Add comment history.Munyoki Kilyungi
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