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AgeCommit message (Expand)Author
2024-03-06Check whether `GN2_SETTINGS` is provided before using defaultFrederick Muriuki Muriithi
2024-01-09Update module pathsFrederick Muriuki Muriithi
2024-01-02Move default settings into gn2 module.Arun Isaac
2023-12-29Remove only up to -c in bin/genenetwork2.Arun Isaac
2023-12-29Namespace all modules under gn2.Arun Isaac
2023-09-05Re-add hard-coded PYTHONPATHMunyoki Kilyungi
2023-09-05Remove PYTHONPATH checkMunyoki Kilyungi
2023-09-05Remove PYTHONPATH injectionMunyoki Kilyungi
2023-07-05Compute the GN_VERSION in setup code not shell scriptFrederick Muriuki Muriithi
2023-05-22Enable running application under pdb.Frederick Muriuki Muriithi
2022-09-12Cleanup `PYTHONPATH`Frederick Muriuki Muriithi
2022-02-17bin: Allow for not starting redis.Arun Isaac
2022-02-07Double quote shell variables to prevent globbing and word splittingFrederick Muriuki Muriithi
2022-01-29Automate setting of the development GN3 repoFrederick Muriuki Muriithi
2022-01-29Add "Partial Correlations" UI elements on collections pageFrederick Muriuki Muriithi
2022-01-28Update PYTHONPATHzsloan
2022-01-28Revert 'bin: Set shebang to sh instead of bash'zsloan
2022-01-28Revert "bin: Set GN2_PROFILE from GUIX_ENVIRONMENT."Arun Isaac
2022-01-28Revert "bin: Do not set environment variables set by guix shell."Arun Isaac
2022-01-27Fix 'Bad substitution' issueFrederick Muriuki Muriithi
2022-01-06bin: Stop execution on error.Arun Isaac
2022-01-06bin: Set shebang to sh instead of bash.Arun Isaac
2022-01-06bin: Do not set environment variables set by guix shell.Arun Isaac
2022-01-06bin: Set GN2_PROFILE from GUIX_ENVIRONMENT.Arun Isaac
2021-12-01Introduce GN3_PYTHONPATH environment variablePjotr Prins
2021-10-28Remove all elasticsearch references in gn2BonfaceKilz
2021-08-06gunicorn production settings: increase process refresh rate to clean up RAM. ...Pjotr Prins
2020-08-20Replace all references to python2.7 with python3.8BonfaceKilz
2020-07-25Updating docs and show how to include a local Python modulePjotr Prins
2020-05-12Remove eventletepysodePjotr Prins
2020-04-26Merge master and testingmasterPjotr Prins
2019-09-24Fixed issue that caused logging in to stop working with new GUIX buildzsloan
2019-02-13Removed pylmm references and related functionsPjotr Prins
2018-11-20Added option to select chromosome from trait page when mappingzsloan
2018-10-01- Can now remove cofactors from correlation scatterplot and select them by ju...zsloan
2018-09-05Production updatesGN2
2018-04-16Docs on elasticsearch usePjotr Prins
2018-04-12README and docsPjotr Prins
2018-04-04ES: docPjotr Prins
2018-04-02Testing moved to PythonPjotr Prins
2018-03-26- Disabled PYTHONPATH injection - fix Guix instead, see https://github.com/pj...Pjotr Prins
2018-03-26Requests addedPjotr Prins
2018-03-26Fixing authentication stuff so it uses parameters properly. Also no PYTHONPAT...Pjotr Prins
2018-03-26Fix conflictPjotr Prins
2018-03-26Add elasticsearch module to the pathMuriithi Frederick Muriuki
2018-02-11Added gunicorn pid so we can not run twicePjotr Prins
2018-02-11Using eventlet workerszsloan
2018-02-10Fix env variable $GEMMA_WRAPPER_COMMANDPjotr Prins
2018-02-10Fixing GEMMA LOCOPjotr Prins
2018-02-10Check for bimbam path and bail out if it is missingPjotr Prins
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