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authorHao Chen2019-08-30 12:00:33 -0500
committerHao Chen2019-08-30 12:00:33 -0500
commit88ab6a3a21fcc2715c9a7528d8b4d15bb7ea85ed (patch)
tree6ab903394e18ec6f8bdfd06257b7f5bbc78fa414 /ratspub.py
parent19bc3078c06bef3c10c55dc6e69018e595d07d17 (diff)
downloadgenecup-88ab6a3a21fcc2715c9a7528d8b4d15bb7ea85ed.tar.gz
add psychiatric keywords
Diffstat (limited to 'ratspub.py')
-rwxr-xr-xratspub.py10
1 files changed, 5 insertions, 5 deletions
diff --git a/ratspub.py b/ratspub.py
index 8ee1f74..7320889 100755
--- a/ratspub.py
+++ b/ratspub.py
@@ -6,7 +6,6 @@ from ratspub_keywords import *
global function_d, brain_d, drug_d, addiction_d, brain_query_term, pubmed_path
-
## turn dictionary (synonyms) to regular expression
def undic(dic):
return "|".join(dic.values())
@@ -103,14 +102,15 @@ function=undic(function_d)
addiction=undic(addiction_d)
drug=undic(drug_d)
-nodecolor={'function':"#A9CCE3", 'addiction': "#D7BDE2", 'drug': "#F9E79F", 'brain':"#A3E4D7", 'gwas':"#AEB6BF"}
-#https://htmlcolorcodes.com/
+nodecolor={'function':"#A9CCE3", 'addiction': "#D7BDE2", 'drug': "#F9E79F", 'brain':"#A3E4D7", 'gwas':"#AEB6BF", 'stress':"#EDBB99", 'psychiatric':"#F5B7B1"}
+#https://htmlcolorcodes.com/ third column down
n0=generate_nodes(function_d, 'function')
n1=generate_nodes(addiction_d, 'addiction')
n2=generate_nodes(drug_d, 'drug')
n3=generate_nodes(brain_d, 'brain')
-default_nodes=n0+n1+n2+n3
-
+n4=generate_nodes(stress_d, 'stress')
+n5=generate_nodes(psychiatric_d, 'psychiatric')
+default_nodes=n0+n1+n2+n3+n4+n5
host= os.popen('hostname').read().strip()
if host=="x1":