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authorHao Chen2020-03-17 15:15:20 -0500
committerHao Chen2020-03-17 15:15:20 -0500
commita7e84e18bce88a1e40f25781a72365818a143ac4 (patch)
tree1874456d096d9a388c29da5c3a988f2786811acc
parent1b516ee692248f4cd75570d9750b14f78554b41f (diff)
downloadgenecup-a7e84e18bce88a1e40f25781a72365818a143ac4.tar.gz
create userdir
-rwxr-xr-xratspub.py7
-rwxr-xr-xserver.py1
2 files changed, 8 insertions, 0 deletions
diff --git a/ratspub.py b/ratspub.py
index 5f57217..549ce12 100755
--- a/ratspub.py
+++ b/ratspub.py
@@ -162,6 +162,12 @@ nj6=generate_nodes_json(psychiatric_d, 'GWAS')
+pubmed_path=os.environ["EDIRECT_PUBMED_MASTER"]
+if ( not pubmed_path):
+ pubmed_path="~/Dropbox/ChenLab/Hakan/RatsPub/PubMed"
+pubmed_path +="/Archive"
+'''
+print (pubmed_path)
host= os.popen('hostname').read().strip()
if host=="x1":
pubmed_path="/run/media/hao/PubMed/Archive/"
@@ -171,3 +177,4 @@ elif host=="penguin2":
pubmed_path="/export2/PubMed/Archive"
elif host=="hchen":
pubmed_path="~/Dropbox/ChenLab/Hakan/RatsPub/PubMed/Archive"
+'''
diff --git a/server.py b/server.py
index 2a3a8cc..15699ac 100755
--- a/server.py
+++ b/server.py
@@ -19,6 +19,7 @@ app=Flask(__name__)
app.config['SECRET_KEY'] = '#DtfrL98G5t1dC*4'
app.config['SQLALCHEMY_DATABASE_URI'] = 'sqlite:///userspub.sqlite'
db = SQLAlchemy(app)
+datadir="/export/ratspub/"
# the sqlite database
class users(db.Model):