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authorhakangunturkun2020-03-02 10:31:14 -0600
committerhakangunturkun2020-03-02 10:31:14 -0600
commit883b446bccb4c17ca0b98e6b557fe489f66dc174 (patch)
tree4fcca0699c21321717ca7397d0149c92384edb88
parentfc8e55b97513c2dd8e61952fcfa80c7653ecf66b (diff)
downloadgenecup-883b446bccb4c17ca0b98e6b557fe489f66dc174.tar.gz
user login/signup and categorical search
-rw-r--r--templates/index.html61
1 files changed, 24 insertions, 37 deletions
diff --git a/templates/index.html b/templates/index.html
index 2d71ef6..52f4962 100644
--- a/templates/index.html
+++ b/templates/index.html
@@ -4,56 +4,43 @@
<h3> <u>R</u>elationship with <u>A</u>ddiction <u>T</u>hrough <u>S</u>earches of <u>Pub</u>Med </span></a>
</h3>
-
<table>
<tr><td >
-
-<p> RatsPub searches PubMed to find <i>sentences</i> that contain the query terms (i.e., gene symbols) and <a href="https://github.com/chen42/RatsPub/blob/master/ratspub_keywords.py">drug addiction-related keywords</a>. These gene-keyword relationships are presented as an interactive graph that can efficiently answer the question <b>"What do we know about these genes and addiction?". </b> Data from <a href="https://www.ebi.ac.uk/gwas/">EBI GWAS catalog </a>are also included in the search. The graph has many interactive elements. For example, clicking gene names will launch a new search for sentences containing the target gene and 200 addiction-related genes. A tabular view is also available. </b>
-
+ <p> RatsPub searches PubMed to find <i>sentences</i> that contain the query terms (i.e., gene symbols) and <a href="https://github.com/chen42/RatsPub/blob/master/ratspub_keywords.py">drug addiction-related keywords</a>. These gene-keyword relationships are presented as an interactive graph that can efficiently answer the question <b>"What do we know about these genes and addiction?". </b> Data from <a href="https://www.ebi.ac.uk/gwas/">EBI GWAS catalog </a>are also included in the search. The graph has many interactive elements. For example, clicking gene names will launch a new search for sentences containing the target gene and 200 addiction-related genes. A tabular view is also available. </b>
<p>Up to 100 gene symbols can be entered in the box below. Gene symbols can be separated by either a space or a semicolon. Aliases will <i>not</i> be automatically included because the large number of false matches associated with gene synonyms retrieved from databases.
-
- <b> {%if "name" in session %}
- {{session['name']}}, your previous searches are <a href="/userarchive">archived </a> for faster retrival.</a>
- {% else %}
- Please sign in to save your searches.
- {% endif %}
- </b>
-
-
+ <b> {%if "name" in session %}
+ {{session['name']}}, your previous searches are <a href="/userarchive">archived </a> for faster retrival.</a>
+ {% else %}
+ Please sign in to save your searches.
+ {% endif %}
+ </b>
</td>
<td >
<div class='img'><img src="/static/ratspub.png" class="img-fluid">
</td>
</tr>
</table>
-
<a>
-
-<b> Example: </b>Rgma Nrxn3 Chrna3 <p>
-
+ <b> Example: </b>Rgma Nrxn3 Chrna3 <p>
<form action="/progress">
- <div class="form-group row">
- <div class="col-sm-10">
- <strong>Please choose keyword categories to be included in the search:</strong>
- <label>
- <input type="checkbox" name="type" value="GWAS" checked> Human GWAS
- <input type="checkbox" name="type" value="addiction" checked> Addiction Stage
- <input type="checkbox" name="type" value="drug" checked> Drugs
- <input type="checkbox" name="type" value="brain" checked> Brain region
- <input type="checkbox" name="type" value="stress" checked> Stress
- <input type="checkbox" name="type" value="psychiatric" checked> Psychiatric Diseases
- <input type="checkbox" name="type" value="function" checked> Function
- </label>
+ <div class="form-group row">
+ <div class="col-sm-10">
+ <strong>Please choose keyword categories to be included in the search:</strong>
+ <label>
+ <input type="checkbox" name="type" value="GWAS" checked> Human GWAS
+ <input type="checkbox" name="type" value="addiction" checked> Addiction Stage
+ <input type="checkbox" name="type" value="drug" checked> Drugs
+ <input type="checkbox" name="type" value="brain" checked> Brain region
+ <input type="checkbox" name="type" value="stress" checked> Stress
+ <input type="checkbox" name="type" value="psychiatric" checked> Psychiatric Diseases
+ <input type="checkbox" name="type" value="function" checked> Function
+ </label>
+ </div>
+ <textarea name="query" class="form-control form-control-lg" type="search" row="3" id="searchform">
+ </textarea>
+ <button type="submit" class="btn btn-primary">Search</button>
</div>
-
-
- <textarea name="query" class="form-control form-control-lg" type="search" row="3" id="searchform">
- </textarea>
- <button type="submit" class="btn btn-primary">Search</button>
- </div>
</form>
-
-
{% endblock %}