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PanGEMMA: Genome-wide Efficient Mixed Model Association
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2025-11-27
Introduce first test
Pjotr Prins
2025-11-27
Update copyrights
Pjotr Prins
2025-11-27
Get rid of compiler warning for bin
Pjotr Prins
2025-11-27
Changing namings to bimbam to make clearer
Pjotr Prins
2025-11-27
No one uses these uchar versions
Pjotr Prins
2025-11-27
Display banner and version info
Pjotr Prins
2025-11-27
Minor tweaks
Pjotr Prins
2025-11-26
Fix progress bar and test larger file
Pjotr Prins
2025-11-26
openblas speed on par
Pjotr Prins
2025-11-24
Added profiler and figured speed regression with openblas
Pjotr Prins
2025-11-23
Comments
Pjotr Prins
2025-11-23
Adding comments
Pjotr Prins
2025-11-23
Replace G with K to avoid (my) confusion
Pjotr Prins
2025-11-22
Call guile code inline from C
Pjotr Prins
2025-11-22
Prevent memory leak
Pjotr Prins
2025-11-22
Introduce libguile and drop version generator
Pjotr Prins
2025-11-20
Comments
Pjotr Prins
2025-11-20
disable segfpe checks because they somehow are not linked in. Maybe re-add ↵
Pjotr Prins
later.
2025-06-27
First working Guile binding
Pjotr Prins
2025-06-27
Create gemmalib and get ready with a guile test
Pjotr Prins
2025-06-22
Add comment
Pjotr Prins
2025-01-04
Added checkpoints for file readers
Pjotr Prins
2025-01-04
Show checkpoints passed with -debug switch
Pjotr Prins
2025-01-03
Adding support for checkpoints and relevant documentation
Pjotr Prins
2024-12-31
Adding note because of mvlmm performance test failure
Pjotr Prins
2024-12-09
Expanded error message
Pjotr Prins
2024-08-17
mvlmm: Dump the initial data.
Artyom Bologov
2024-08-17
Add -debug-dump CLI flag for dumping data to files.
Artyom Bologov
2024-08-17
gemma.cpp: Rephrase main LMM track for searchability.
Artyom Bologov
2024-08-16
gemma,lmm,mvlmm: Add data debug printing everywhere.
Artyom Bologov
2024-08-16
gemma.cpp: Do eigendecomposition the same way as with LMM.
Artyom Bologov
This way, one can export the eigen* data that matches the one used while doing LMM. Otherwise the exported eigenvectors are sliiiiightly off and break the computations depending on them in Mgamma.
2023-06-29
Add limits
Pjotr Prins
2023-06-29
Fix build on guix using limits
Pjotr Prins
2022-08-06
Add warning when genotypes not in range for mean BIMBAM
Pjotr Prins
2022-08-05
Bump version and minor output
Pjotr Prins
2022-02-15
Control P_yy round-off.
Pjotr Prins
Fixes #210
2021-08-25
Static release
Pjotr Prins
2021-08-25
Add -lmm 9 test and make sure other file formats work
Pjotr Prins
2021-08-25
Disable debugging output
Pjotr Prins
2021-08-25
iter could go out of bounds in CalcLambda - may explain github #243
Pjotr Prins
2021-08-25
Make sure P_yy=0 does not fail. Fix undefined iter in loop. Make sure there ↵
Pjotr Prins
is cleanup on exit
2021-08-22
Disable round-off correction
Pjotr Prins
2021-08-16
README.md
Pjotr Prins
README
2021-08-15
Version
Pjotr Prins
2021-08-14
Aim at fix of
Pjotr Prins
GSL ERROR: function value is not finite in brent.c at line 202 errno 9 #210
2021-08-11
Minor fix and bump version
Pjotr Prins
2021-08-04
Document switch -lmm 9
Pjotr Prins
2021-08-02
* Changed banner to show Copyright (C) 2012–2021, Xiang Zhou, Pjotr Prins ↵
Pjotr Prins
and team
2021-01-29
Release 0.98.4
Pjotr Prins
2021-01-11
Only free randomizer when initialized
Pjotr Prins
Fixes: #239
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