Age | Commit message (Expand) | Author |
2017-12-07 | Travis: fixes | Pjotr Prins |
2017-12-07 | More notes and removed unused LULndet | Pjotr Prins |
2017-12-07 | Some more overflow checks | Pjotr Prins |
2017-12-06 | Some cleanup on matrix checking | Pjotr Prins |
2017-12-06 | Fix openblas complaint | Pjotr Prins |
2017-12-06 | Integer overflow checking for matrix dgemm and adding path for OpenBlas inclu... | Pjotr Prins |
2017-11-30 | Fixed never-ending run when analyzing only a single SNP, ref... https://groups.google.com/forum/#!topic/gemma-discussion/a-ommTiucC8
| Pjotr Prins |
2017-11-22 | Explicit include of gsl_sys.h for GSLv1 | Pjotr Prins |
2017-11-22 | Remove compiler warnings | Pjotr Prins |
2017-11-22 | Remove compiler warnings and add check is_nan | Pjotr Prins |
2017-11-15 | Nans: introducing checking on mem free | Pjotr Prins |
2017-11-11 | Fix compiler warnings | Pjotr Prins |
2017-11-11 | Cleaning up buffer use thanks to compiler warnings | Pjotr Prins |
2017-11-11 | Cleaning up compiler warnings | Pjotr Prins |
2017-11-10 | Remove compiler warnings | Pjotr Prins |
2017-11-10 | Tests: added more bslmm tests | Pjotr Prins |
2017-11-09 | Adding tests for bslmm | Pjotr Prins |
2017-11-09 | Disabled debug output when not using -debug | Pjotr Prins |
2017-10-26 | VERSION now contains the GEMMA version number. A script generates a header...file named ./src/version.h. See Makefile for details.
| Pjotr Prins |
2017-10-26 | Changed SNPs into SNPs/var in output, ref https://github.com/genetics-statist... | Pjotr Prins |
2017-10-26 | Get rid of compiler warning | Pjotr Prins |
2017-10-26 | Changed SNPs into SNPs/var in output, ref https://github.com/genetics-statist... | Pjotr Prins |
2017-10-23 | Travis-ci:...- Disabled gcc-6 since we develop with later tools anyway
- Turned the release test into a simple integration test
- Adding MacOSX on Travis-ci
Tests: Adding tests for Plink w. LOCO
Safety: Introduce strtok_safe to get rid of segfaults
| Pjotr Prins |
2017-10-20 | NaN check only when -debug is used | Pjotr Prins |
2017-10-18 | Tests still pass with safe_alloc (which sets the buffers to NaNs on allocation) | Pjotr Prins |
2017-10-14 | Travis | Pjotr Prins |
2017-10-14 | More travis | Pjotr Prins |
2017-10-14 | Travis: more fixes | Pjotr Prins |
2017-10-14 | Travis | Pjotr Prins |
2017-10-14 | OpenBlas info | Pjotr Prins |
2017-10-14 | Travis fixes | Pjotr Prins |
2017-10-14 | Older openblas does not like blasint | Pjotr Prins |
2017-10-14 | Travis fix | Pjotr Prins |
2017-10-14 | More disabling of eigenlib (faster compilation) and avoid OPENBLAS_CONST whic... | Pjotr Prins |
2017-10-13 | Refactored debug settings...Replaced eigenlib_dgemm with fast_dgemm - 10-30% speed gain for GEMMA
| Pjotr Prins |
2017-10-13 | Openblas specific include file | Pjotr Prins |
2017-10-13 | Replacing first dgemm - tests fail | Pjotr Prins |
2017-10-13 | OpenBlas: preparing for dgemm use | Pjotr Prins |
2017-10-13 | Fix header for not showing se | Pjotr Prins |
2017-10-13 | Disable se for lmm=2, see https://github.com/genetics-statistics/GEMMA/issues/81 | Pjotr Prins |
2017-10-13 | Fixed mean and iterations in Plink - now this works | Pjotr Prins |
2017-10-13 | Progressbar update | Pjotr Prins |
2017-10-13 | Consolidate into ProgressBar into one function and related updates | Pjotr Prins |
2017-10-13 | Fix embarrassing bug that broke BIMBAM for larger datasets - found it when po... | Pjotr Prins |
2017-10-13 | debug message: minor change | Pjotr Prins |
2017-10-13 | Bumped up version. | Peter Carbonetto |
2017-10-13 | Change ulong type to long. | Peter Carbonetto |
2017-10-13 | Fixed warning with assignment in if statement. | Peter Carbonetto |
2017-10-13 | Make sure __ASSERT_VOID_CAST works | Pjotr Prins |
2017-10-13 | Removing warnings on debug.h assignment | Pjotr Prins |