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2025-12-01Toyed a bit with SNP filtering. I think my unfiltered approach for computing ↵Pjotr Prins
GRM is probably more accurate and faster without any SNP filtering.
2025-11-30Extracting MAF computationPjotr Prins
2025-11-30Write out KPjotr Prins
2025-11-30K: reads geno mdbPjotr Prins
2025-11-30Fetch ni_total from lmdbPjotr Prins
2025-11-29Introduce lmdb++Pjotr Prins
2025-11-28Toying with lmdbiPjotr Prins
2025-11-28Simplify a bit and make guix.scm work without running out of RAMPjotr Prins
2025-11-28working on mdbPjotr Prins
2025-11-28Prepare for using mdb geno in a testPjotr Prins
2025-11-27Introduce first testPjotr Prins
2025-11-27Update copyrightsPjotr Prins
2025-11-27Get rid of compiler warning for binPjotr Prins
2025-11-27Changing namings to bimbam to make clearerPjotr Prins
2025-11-27No one uses these uchar versionsPjotr Prins
2025-11-27Display banner and version infoPjotr Prins
2025-11-27Minor tweaksPjotr Prins
2025-11-26Fix progress bar and test larger filePjotr Prins
2025-11-26openblas speed on parPjotr Prins
2025-11-24Added profiler and figured speed regression with openblasPjotr Prins
2025-11-23CommentsPjotr Prins
2025-11-23Adding commentsPjotr Prins
2025-11-23Replace G with K to avoid (my) confusionPjotr Prins
2025-11-22Call guile code inline from CPjotr Prins
2025-11-22Prevent memory leakPjotr Prins
2025-11-22Introduce libguile and drop version generatorPjotr Prins
2025-11-20CommentsPjotr Prins
2025-11-20disable segfpe checks because they somehow are not linked in. Maybe re-add ↵Pjotr Prins
later.
2025-06-27First working Guile bindingPjotr Prins
2025-06-27Create gemmalib and get ready with a guile testPjotr Prins
2025-06-22Add commentPjotr Prins
2025-01-04Added checkpoints for file readersPjotr Prins
2025-01-04Show checkpoints passed with -debug switchPjotr Prins
2025-01-03Adding support for checkpoints and relevant documentationPjotr Prins
2024-12-31Adding note because of mvlmm performance test failurePjotr Prins
2024-12-09Expanded error messagePjotr Prins
2024-08-17mvlmm: Dump the initial data.Artyom Bologov
2024-08-17Add -debug-dump CLI flag for dumping data to files.Artyom Bologov
2024-08-17gemma.cpp: Rephrase main LMM track for searchability.Artyom Bologov
2024-08-16gemma,lmm,mvlmm: Add data debug printing everywhere.Artyom Bologov
2024-08-16gemma.cpp: Do eigendecomposition the same way as with LMM.Artyom Bologov
This way, one can export the eigen* data that matches the one used while doing LMM. Otherwise the exported eigenvectors are sliiiiightly off and break the computations depending on them in Mgamma.
2023-06-29Add limitsPjotr Prins
2023-06-29Fix build on guix using limitsPjotr Prins
2022-08-06Add warning when genotypes not in range for mean BIMBAMPjotr Prins
2022-08-05Bump version and minor outputPjotr Prins
2022-02-15Control P_yy round-off.Pjotr Prins
Fixes #210
2021-08-25Static releasePjotr Prins
2021-08-25Add -lmm 9 test and make sure other file formats workPjotr Prins
2021-08-25Disable debugging outputPjotr Prins
2021-08-25iter could go out of bounds in CalcLambda - may explain github #243Pjotr Prins
generated by cgit-pink 1.4.1 (git 2.36.1) at 2025-12-20 09:43:52 +0000