Age | Commit message (Expand) | Author |
2020-05-28 | Fix copiles on gcc 10. Main thing is not to mix BLAS includes from...OpenBLAS, GSL (and Eigen when used).
| Pjotr Prins |
2020-05-22 | Removing more eigenlib references | Pjotr Prins |
2020-05-22 | Fixes for gcc (GCC) 10.1.0...Started to remove eigenlib (again)
| Pjotr Prins |
2020-05-21 | Fix new gcc error | Pjotr Prins |
2018-12-10 | Bug fix release 0.98.1 | Pjotr Prins |
2018-12-10 | Fixes regression introduced by sharing plink algorithm with BIMBAM....closes #188
| Pjotr Prins |
2018-09-28 | Updated version | Pjotr Prins |
2018-09-28 | Fixes regression #179 | Pjotr Prins |
2018-09-28 | Atlas compilation | Pjotr Prins |
2018-09-27 | Using -no-check by default now | Pjotr Prins |
2018-09-27 | Inlining GSL calls | Pjotr Prins |
2018-09-26 | Updated version and added performance stats | Pjotr Prins |
2018-09-19 | Fix progressbar for K and started on design doc | Pjotr Prins |
2018-09-19 | Replace safeGetline with native version | Pjotr Prins |
2018-09-18 | Speedup: kinship computation | Pjotr Prins |
2018-09-18 | Disable nan checking with no-check | Pjotr Prins |
2018-09-15 | Using Guix container to build with gcc and clang | Pjotr Prins |
2018-09-15 | Remove noisy batch_compute message | Pjotr Prins |
2018-09-07 | Matrices positive definite issues | Pjotr Prins |
2018-09-06 | Show warning on some unused matrices | Pjotr Prins |
2018-09-06 | Fix travis error | Pjotr Prins |
2018-09-06 | Sometimes a value gets negative zero causing a NaN on the sqrt....Closes #61
| Pjotr Prins |
2018-09-06 | More debugging and a performance check | Pjotr Prins |
2018-09-06 | More debugging info and raise SIGINT instead of exit | Pjotr Prins |
2018-09-06 | Further debugging | Pjotr Prins |
2018-09-01 | CalcPab notes | Pjotr Prins |
2018-08-31 | More testing | Pjotr Prins |
2018-08-31 | Improving readability | Pjotr Prins |
2018-08-31 | Continue debugging calcpab | Pjotr Prins |
2018-08-30 | Debugging calcPab | Pjotr Prins |
2018-08-26 | More value checking and bounds checking | Pjotr Prins |
2018-08-26 | Make sure tau_inv is initialized outside loop - gets rid of compiler warning | Pjotr Prins |
2018-08-26 | debug: feenableexcept can be disabled using legacy mode | Pjotr Prins |
2018-08-25 | debug: feenableexcept for MacOS and limit to Intel x64 machines | Pjotr Prins |
2018-08-25 | Number format checking in strict mode. Also fixes #149 | Pjotr Prins |
2018-08-25 | Added remarks | Pjotr Prins |
2018-08-25 | segfpe handling | Pjotr Prins |
2018-08-25 | eigenvalues: some error checking added | Pjotr Prins |
2018-07-27 | Add floating point hardware checking for Intel on GNU compilers...When using the -check function (the default) it is enabled for Kinship
computation and LM/LMM up to individual SNP computation. This means
there can no longer be NaN values for matrices that are reused for every
SNP, but it is possible to have NaN for individual SNPs.
Fixes #161
| Pjotr Prins |
2018-07-26 | Unittest: added test for forcing and catching floating point errors (this works) | Pjotr Prins |
2018-07-14 | Guix: add more build information to the final binary | Pjotr Prins |
2018-06-29 | Fix conflict | Pjotr Prins |
2018-06-29 | Merge branch 'master' of github.com:genetics-statistics/GEMMA | Pjotr Prins |
2018-06-05 | Typo: sepcified -> specified | Dylan Aïssi |
2018-02-28 | MinGW mkdir function doesn't allow for S_IRWXU, params | DannyArends |
2018-02-28 | renamed import io.h to gemma_io.h | DannyArends |
2018-02-28 | io.h is a std lib function for MinGW64, renamed it to gemma_io.h | DannyArends |
2018-02-22 | Changed handling of version number so it does not modify every compile | Pjotr Prins |
2018-01-27 | Extra error info on strtok parsing failure - should help support | Pjotr Prins |
2018-01-26 | Always check input data for strtok - unless -no-check is used | Pjotr Prins |