diff options
| -rwxr-xr-x | test/test_suite.sh | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/test/test_suite.sh b/test/test_suite.sh index c6aa38e..effc056 100755 --- a/test/test_suite.sh +++ b/test/test_suite.sh @@ -2,10 +2,13 @@ gemma=../bin/gemma -testCenteredRelatednessMatrix() { +testCenteredRelatednessMatrixK() { $gemma -g ../example/mouse_hs1940.geno.txt.gz -p ../example/mouse_hs1940.pheno.txt \ - -a ../example/mouse_hs1940.anno.txt -gk -o mouse_hs1940 + -a ../example/mouse_hs1940.anno.txt -gk -o mouse_hs1940 assertEquals "3763600" `wc -w < output/mouse_hs1940.cXX.txt` + # assertEquals "15f680c" `md5sum < output/mouse_hs1940.cXX.txt | head -c 7` + assertEquals "0.335" `head -c 5 output/mouse_hs1940.cXX.txt` + assertEquals "29.691" `awk '{s+=substr($1,0,6)}END{print s}' output/mouse_hs1940.cXX.txt` } shunit2=`which shunit2` |