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#!/usr/bin/env bash
gemma=../bin/gemma
testCenteredRelatednessMatrix() {
$gemma -g ../example/mouse_hs1940.geno.txt.gz -p ../example/mouse_hs1940.pheno.txt \
-a ../example/mouse_hs1940.anno.txt -gk -o mouse_hs1940
assertEquals "3763600" `wc -w < output/mouse_hs1940.cXX.txt`
}
shunit2=`which shunit2`
if [ -x "$shunit2" ]; then
. $shunit2
else
# try to run the locally installed shunit2
. ../shunit2-2.0.3/src/shell/shunit2
fi
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