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| author | Pjotr Prins | 2017-10-13 15:23:00 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2017-10-13 15:27:24 +0000 |
| commit | fdb48997ee3ed2b326a92f8e0cc7f72a4b38d8c8 (patch) | |
| tree | 5f62e06dbacdec2d4ee60da9112508615d42fc1f /test/dev_test_suite.sh | |
| parent | 7eca3c49b7790007a4190b73209cab9ffb2bb117 (diff) | |
| download | pangemma-fdb48997ee3ed2b326a92f8e0cc7f72a4b38d8c8.tar.gz | |
Refactored debug settings
Replaced eigenlib_dgemm with fast_dgemm - 10-30% speed gain for GEMMA
Diffstat (limited to 'test/dev_test_suite.sh')
| -rwxr-xr-x | test/dev_test_suite.sh | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh index 0ccc24c..77604be 100755 --- a/test/dev_test_suite.sh +++ b/test/dev_test_suite.sh @@ -11,7 +11,7 @@ testBXDStandardRelatednessMatrixKSingularError() { -c ../example/BXD_covariates.txt \ -a ../example/BXD_snps.txt \ -gk \ - -debug -strict \ + -debug \ -o $outn assertEquals 22 $? # should show singular error } @@ -24,7 +24,7 @@ testBXDStandardRelatednessMatrixK() { -c ../example/BXD_covariates2.txt \ -a ../example/BXD_snps.txt \ -gk \ - -debug -strict \ + -debug \ -o $outn assertEquals 0 $? outfn=output/$outn.cXX.txt @@ -40,7 +40,7 @@ testBXDLMMLikelihoodRatio() { -a ../example/BXD_snps.txt \ -k ./output/BXD.cXX.txt \ -lmm 2 -maf 0.1 \ - -debug -strict \ + -debug \ -o $outn assertEquals 0 $? |