From fdb48997ee3ed2b326a92f8e0cc7f72a4b38d8c8 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Fri, 13 Oct 2017 15:23:00 +0000 Subject: Refactored debug settings Replaced eigenlib_dgemm with fast_dgemm - 10-30% speed gain for GEMMA --- test/dev_test_suite.sh | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to 'test/dev_test_suite.sh') diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh index 0ccc24c..77604be 100755 --- a/test/dev_test_suite.sh +++ b/test/dev_test_suite.sh @@ -11,7 +11,7 @@ testBXDStandardRelatednessMatrixKSingularError() { -c ../example/BXD_covariates.txt \ -a ../example/BXD_snps.txt \ -gk \ - -debug -strict \ + -debug \ -o $outn assertEquals 22 $? # should show singular error } @@ -24,7 +24,7 @@ testBXDStandardRelatednessMatrixK() { -c ../example/BXD_covariates2.txt \ -a ../example/BXD_snps.txt \ -gk \ - -debug -strict \ + -debug \ -o $outn assertEquals 0 $? outfn=output/$outn.cXX.txt @@ -40,7 +40,7 @@ testBXDLMMLikelihoodRatio() { -a ../example/BXD_snps.txt \ -k ./output/BXD.cXX.txt \ -lmm 2 -maf 0.1 \ - -debug -strict \ + -debug \ -o $outn assertEquals 0 $? -- cgit v1.2.3