From 7064eab1170a422d4ecde84671f5952059341791 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Tue, 19 Dec 2017 13:16:25 +0000
Subject: Documentation and Travis fixes

---
 src/gemma.cpp | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

(limited to 'src')

diff --git a/src/gemma.cpp b/src/gemma.cpp
index e31eaed..edd79d7 100644
--- a/src/gemma.cpp
+++ b/src/gemma.cpp
@@ -543,9 +543,13 @@ void GEMMA::PrintHelp(size_t option) {
     cout << " -lmax     [num]          "
          << " specify maximum value for lambda (default 1e+5)" << endl;
     cout
-        << " -region   [num]          "
+        << " -region    [num]          "
         << " specify the number of regions used to evaluate lambda (default 10)"
         << endl;
+    cout << " -loco     [chr]          "
+         << " leave one chromosome out (LOCO) by name (requires -a annotation "
+            "file)"
+         << endl;
     cout << endl;
   }
 
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