add GXE test

1 files changed, 34 insertions, 0 deletions

diff --git a/src/eigenlib.h b/src/eigenlib.h
new file mode 100644
index 0000000..e9768c2
--- /dev/null
+++ b/src/eigenlib.h
@@ -0,0 +1,34 @@
+/*
+	Genome-wide Efficient Mixed Model Association (GEMMA)
+    Copyright (C) 2011  Xiang Zhou
+
+    This program is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+*/
+
+#ifndef __EIGENLIB_H__                
+#define __EIGENLIB_H__
+
+#include <vector>
+
+using namespace std;
+
+
+void eigenlib_dgemm (const char *TransA, const char *TransB, const double alpha, const gsl_matrix *A, const gsl_matrix *B, const double beta, gsl_matrix *C);
+void eigenlib_dgemv (const char *TransA, const double alpha, const gsl_matrix *A, const gsl_vector *x, const double beta, gsl_vector *y);
+void eigenlib_invert(gsl_matrix *A);
+void eigenlib_dsyr (const double alpha, const gsl_vector *b, gsl_matrix *A);
+void eigenlib_eigensymm (const gsl_matrix *G, gsl_matrix *U, gsl_vector *eval);
+
+
+#endif