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| author | Peter Carbonetto | 2017-05-27 16:07:07 -0500 |
|---|---|---|
| committer | Peter Carbonetto | 2017-05-27 16:07:07 -0500 |
| commit | 338bf7b7db8805515597d9e2d4b5dcbe2e40dfd1 (patch) | |
| tree | ee0956354916c7795a5c2b656c4ff5405f09271f /example | |
| parent | 94b4437dba1bd0e2767a73d0b79c5da9f393a1e3 (diff) | |
| download | pangemma-338bf7b7db8805515597d9e2d4b5dcbe2e40dfd1.tar.gz | |
Removed src/Eigen; instead, Eigen C++ library is downloaded separately. See Issue #42 for tests performed.
Diffstat (limited to 'example')
| -rw-r--r-- | example/demo.txt | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/example/demo.txt b/example/demo.txt index 3231ddc..80c5c95 100644 --- a/example/demo.txt +++ b/example/demo.txt @@ -23,7 +23,9 @@ ## To perform association tests with a univariate linear mixed model: -../bin/gemma -g mouse_hs1940.geno.txt.gz -p mouse_hs1940.pheno.txt -n 1 -a mouse_hs1940.anno.txt -k ./output/mouse_hs1940.cXX.txt -lmm -o mouse_hs1940_CD8_lmm +../bin/gemma -g mouse_hs1940.geno.txt.gz -p mouse_hs1940.pheno.txt -n 1 \ + -a mouse_hs1940.anno.txt -k ./output/mouse_hs1940.cXX.txt -lmm \ + -o mouse_hs1940_CD8_lmm # The result for top 5 SNPs should look like this: chr rs ps n_miss allele1 allele0 af beta se l_remle p_wald |