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#!/bin/sh
# Build a Singularity (SquashFS) image of mempang-workshop plus a
# minimal shell environment, and drop a copy in ~/tmp. See
# lib-pangenome-pack.sh for the naming convention and outputs.
#
# Usage: scripts/create-singularity-pangenome-tools.sh
. "$(dirname "$0")/lib-pangenome-pack.sh"
pangenome_pack squashfs gz.squashfs singularity
pangenome_write_outputs
echo
echo "Singularity image ready:"
ls -lh "$PACK_TARGET"
echo "md5sum: $MD5SUM_FILE"
echo "inventory: $INVENTORY"
echo
echo "Run with:"
echo " singularity exec $PACK_TARGET <command>"
echo " singularity shell $PACK_TARGET"
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