| Age | Commit message (Expand) | Author |
|---|
| 10 days | gn-auth: upgrade to commit 073395f. | Frederick Muriuki Muriithi |
| 10 days | gn-guile: Update gn-guile.•••* gn/packages/guile.scm: Import guile-lmdb and guile-lib.
(gn-guile): Update to 169d26710c978484f8e9464a95be6eaa47fa704e. Also,
make lmdb-publishdata-export script executable.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 10 days | gn: genenetwork2: Add javascript-xterm, javascript-xterm-style.•••* gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add
javascript-xterm, javascript-xterm-style.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Alexander_Kabui |
| 10 days | gn: javascript: Update javascript-xterm, javascript-xterm-style.•••* gn/packages/javascript.scm (javascript-xterm): Update to 5.3.0
* gn/packages/javascript.scm (javascript-xterm-style): Update to 5.3.0
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Alexander_Kabui |
| 12 days | gn: pggb: Use wfmash-0.14 instead of the latest wfmash.•••* gn/packages/bioinformatics.scm (pggb)[inputs]: Replace wfmash with
wfmash-0.14.
| Arun Isaac |
| 12 days | gn: Add wfmash-0.14.•••* gn/packages/bioinformatics.scm (wfmash-0.14): New variable.
| Arun Isaac |
| 2025-02-11 | gn: pggb: Update to 0.7.2.•••* gn/packages/bioinformatics.scm (pggb): Update to 0.7.2.
| Arun Isaac |
| 2025-02-11 | gn: pggb: Remove unused dependencies.•••These dependencies are referred to in the documentation and put into
the Docker image, but are not actually used by pggb.
* gn/packages/bioinformatics.scm (pggb)[inputs]: Remove fastix,
mummer, pafplot and vcflib.
| Arun Isaac |
| 2025-02-11 | gn: odgi: Disable tests.•••* gn/packages/bioinformatics.scm (odgi): Disable tests.
| Arun Isaac |
| 2025-02-10 | gn-guile: Make dependencies available in profile after build | Frederick Muriuki Muriithi |
| 2025-02-10 | genenetwork2: Upgrade to commit 4f9a46e. | Frederick Muriuki Muriithi |
| 2025-02-04 | gn-uploader: Upgrade to commit d8b58c3. | Frederick Muriuki Muriithi |
| 2025-02-03 | gn-auth: upgrade to commit 8e64f7f. | Frederick Muriuki Muriithi |
| 2025-02-03 | gn-auth: upgrade to commit eec8128. | Frederick Muriuki Muriithi |
| 2025-01-29 | gn-uploader: upgrade to commit 8ab53c9. | Frederick Muriuki Muriithi |
| 2025-01-29 | gn-uploader: Upgrade to commit 848bd53. | Frederick Muriuki Muriithi |
| 2025-01-29 | gn-uploader: Add javascript-datatables as a dependency. | Frederick Muriuki Muriithi |
| 2025-01-28 | Change "dirs-allowed" setting to a list•••Virtuoso's DirsAllowed setting expects a comma-delimited list of
directories. See
https://docs.openlinksw.com/virtuoso/ch-server/#ini_parameters
Initially, we only allowed one path. This commit fixes that, allowing
a list of paths to be passed in.
| Frederick Muriuki Muriithi |
| 2025-01-28 | gn-uploader: Bump up commit to b7d4263. | Frederick Muriuki Muriithi |
| 2025-01-28 | gn-uploader: Upgrade to version 0.1.0 and commit cb57ff0e.•••We are gaining some stability at this point, so we raise the minor
version. Also mark the commit for the demo.
| Frederick Muriuki Muriithi |
| 2025-01-26 | Genenetwork3: upgrade to commit 0d902ec. | Frederick Muriuki Muriithi |
| 2025-01-25 | Genenetwork2: Upgrade to commit 314c6d5. | Frederick Muriuki Muriithi |
| 2025-01-25 | gnu: r-rrbgen: Fix name typo.•••* gn/packages/bioinformatics.scm (r-rrbgen)[name]: Fix typo.
| Arun Isaac |
| 2025-01-22 | genenetwork2: Upgrade to commit 0db8dca.•••Fixes bug with the registration page.
| Frederick Muriuki Muriithi |
| 2025-01-21 | gn-libs: upgrade to commit 72a95f8. | Frederick Muriuki Muriithi |
| 2025-01-20 | gn-auth: Upgrade to e345a04. | Frederick Muriuki Muriithi |
| 2025-01-20 | Genenetwork3: Upgrade to commit 5d2aebb. | Frederick Muriuki Muriithi |
| 2025-01-20 | Genenetwork2: Upgrade to commit 6d4d48e. | Frederick Muriuki Muriithi |
| 2025-01-10 | genenetwork2: upgrade to commit 798d3c6. | Frederick Muriuki Muriithi |
| 2025-01-10 | gn-auth: upgrade to commit 877a7a3. | Frederick Muriuki Muriithi |
| 2025-01-08 | genenetwork2: upgrade to commit c450890. | Frederick Muriuki Muriithi |
| 2025-01-08 | genenetwork2: upgrade to commit 854639b. | Frederick Muriuki Muriithi |
| 2025-01-08 | genenetwork2: upgrade to commit dc606f3. | Frederick Muriuki Muriithi |
| 2025-01-08 | genenetwork2: upgrade to commit 236a488. | Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork2: upgrade to commit 9bdc8ca. | Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork2: update to commit 7e6bfe4. | Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork2: upgrade to commit 8bf483a. | Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork2: Upgrade to commit 125c436. | Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork2: Upgrade to commit 93dd7f7•••This is to help troubleshoot the refresh token process and identify
causes of failures.
| Frederick Muriuki Muriithi |
| 2025-01-07 | genenetwork3: Add coreutils-minimal to genenetwork3.•••* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add
coreutils-minimal.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2025-01-06 | genenetwork2: upgrade to commit 55da580. | Frederick Muriuki Muriithi |
| 2025-01-06 | gn-guile: Patch "git -C" with correct git path.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2025-01-06 | gn-guile: Add missing quotes around patche "git" command.•••* gn/packages/guile.scm: (gn-guile): Add missing quotes around "git"
command.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2025-01-06 | gn-guile: Patch "git" in web/view/markdown.scm.•••* gn/packages/guile.scm: Import git-minimal.
(gn-guile): Patch git-minimal in web/view/markdown.scm.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2025-01-03 | gn-auth: upgrade to 788953b. | Frederick Muriuki Muriithi |
| 2025-01-03 | genenetwork2: upgrade to a08d766 | Frederick Muriuki Muriithi |
| 2025-01-02 | genenetwork3: upgrade to commit f9f7521. | Frederick Muriuki Muriithi |
| 2025-01-02 | genenetwork3: upgrade to commit a6ba760. | Frederick Muriuki Muriithi |
| 2024-12-18 | Substitute "guile" command with path from the store.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
| 2024-12-17 | Update gn-guile script.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| Munyoki Kilyungi |
