| Age | Commit message (Expand) | Author |
|---|
| 2022-07-01 | gn: tissue: Update to 0.1.0-2.b15edb1....* gn/packages/gemini.scm (tissue): Update to 0.1.0-2.b15edb1.
| Arun Isaac |
| 2022-06-30 | gn: tissue: Update to 0.1.0-1.fd6668c....* gn/packages/gemini.scm (tissue): Update to 0.1.0-1.fd6668c.
| Arun Isaac |
| 2022-06-29 | gn: genenetwork3: Add gn-rust-correlation....* gn/packages/genenetwork.scm: Import module crates-io.
(genenetwork3) [propagated-inputs]: Add gn-rust-correlations.
| BonfaceKilz |
| 2022-06-29 | gn: Add gn-rust-correlation....* gn/packages/crates-io.scm (gn-rust-correlation): New variable
Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
| Alexander_Kabui |
| 2022-06-29 | gn: Add rust-gsl....* gn/packages/crates-io.scm (rust-gsl): New variable.
Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
| Alexander_Kabui |
| 2022-06-29 | gn: Add rust-gsl-sys....* gn/packages/crates-io.scm (rust-gsl-sys): New variable.
Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
| Alexander_Kabui |
| 2022-06-29 | gn: tissue: Update to 0.1.0-0.2866d0c....* gn/packages/gemini.scm (tissue): Update to 0.1.0-0.2866d0c.
| Arun Isaac |
| 2022-06-29 | gn: tissue: Update to 0.1.0-0.2ef55e6....* gn/packages/gemini.scm (tissue): Update to 0.1.0-0.2ef55e6.
| Arun Isaac |
| 2022-06-29 | gn: gitea: Update to 1.15.11. | Efraim Flashner |
| 2022-06-29 | gn: tissue: Update to 0.1.0-0.983fc85....* gn/packages/gemini.scm: Do not import (gnu packages
version-control). Import (gnu packages guile-xyz) and (guix gexp).
(tissue): Update to 0.1.0-0.983fc85.
| Arun Isaac |
| 2022-06-21 | gn: genenetwork2: Update it...* gn/packages/genenetwork.scm (commit): Update it.
(source): Update hash.
| BonfaceKilz |
| 2022-06-21 | gn: Update genenetwork3...* gn/packages/genenetwork.scm (commit): Update it.
(source): Update hash.
(propagated-inputs): Remove python-ipfshttpclient.
| BonfaceKilz |
| 2022-06-21 | gn: Add quast. | Efraim Flashner |
| 2022-06-21 | gn: metaeuk: Fix building package. | Efraim Flashner |
| 2022-06-14 | gn: genenetwork3: Use upstream python-pingouin....* gn/packages/genenetwork.scm (python-seaborn-without-tests,
python-pingouin-with-working-python-seaborn): Delete variables.
(genenetwork3)[propagated-inputs]: Replace
python-pingouin-with-working-python-seaborn with upstream
python-pingouin.
| Arun Isaac |
| 2022-06-10 | gn: Update genenetwork3...* gn/packages/genenetwork.scm (commit): Update it.
(source): Update hash.
(propagated-inputs): Add python-lmdb.
| BonfaceKilz |
| 2022-06-07 | gn: hap.py: Add previously missing inputs. | Efraim Flashner |
| 2022-06-07 | gn: Fix building python2-bx-python. | Efraim Flashner |
| 2022-06-07 | gn: pplacer-scripts: Update argument field. | Efraim Flashner |
| 2022-06-07 | gn: python2-biopython: Fix building package. | Efraim Flashner |
| 2022-06-07 | gn: Fix building python2-rpy2. | Efraim Flashner |
| 2022-06-07 | gn: Hide inputs which have been dropped by Guix. | Efraim Flashner |
| 2022-06-07 | gn: Add missing module imports | Efraim Flashner |
| 2022-06-07 | gn: cleanup yaj imports | Efraim Flashner |
| 2022-06-01 | gn: Add python2-biopython....python2-biopython has been removed from Guix upstream.
* gn/packages/bioinformatics.scm (python2-biopython): New variable.
| Arun Isaac |
| 2022-06-01 | gn: bioinformatics: Import (gnu packages ocaml)....* gn/packages/bioinformatics.scm: Import (gnu packages ocaml) required
by dependencies of pplacer.
| Arun Isaac |
| 2022-06-01 | gnu: Add pplacer....pplacer and pplacer-scripts have been removed from Guix upstream.
* gn/packages/bioinformatics.scm (pplacer, pplacer-scripts): New
variables.
| Arun Isaac |
| 2022-06-01 | gnu: Add python-pytest-runner-2....python-pytest-runner-2 has been removed from Guix upstream.
* gn/packages/bioinformatics.scm (python-pytest-runner-2): New
variable.
| Arun Isaac |
| 2022-06-01 | gn: Adjust vg for other architectures | Efraim Flashner |
| 2022-06-01 | ruby-cbor upstreamed | Efraim Flashner |
| 2022-05-24 | New dependency: (genenetwork3: diffutils)...- Genenetwork3 depends on diffutils
| Frederick Muriuki Muriithi |
| 2022-05-11 | genenetwork-qc: Update the release | Frederick Muriuki Muriithi |
| 2022-05-09 | Add definition for genenetwork-qc...Add a package definition for the GeneNetwork Quality Control
application.
| Frederick Muriuki Muriithi |
| 2022-05-05 | services: databases: Add virtuoso maximum dirty buffers configuration....*
gn/services/databases.scm (<virtuoso-configuration>)[maximum-dirty-buffers]:
New field.
(virtuoso-shepherd-service): Serialize maximum-dirty-buffers field.
| Arun Isaac |
| 2022-05-05 | services: databases: Add virtuoso number of buffers configuration....*
gn/services/databases.scm (<virtuoso-configuration>)[number-of-buffers]:
New field.
(virtuoso-shepherd-service): Serialize number-of-buffers field.
| Arun Isaac |
| 2022-05-03 | gn: cva6: Set #:make-flags instead of overriding the build phase....* gn/packages/riscv.scm (cva6)[arguments]: Set #:make-flags instead of
overriding the build phase.
| Arun Isaac |
| 2022-05-03 | gn: cva6: Switch to upstream source instead of fork....* gn/packages/riscv.scm (cva6)[source]: Use upstream openhwgroup
source instead of the cornell-brg fork.
[arguments]: Add fix-stdout phase. Pass RISV=0 to make in build phase.
| Arun Isaac |
| 2022-05-02 | gn: cva6: Install executable as ariane....* gn/packages/riscv.scm (cva6)[arguments]: In the custom install
phase, install executable as ariane instead of Variane_testharness.
| Arun Isaac |
| 2022-05-02 | gn: Add cva6....* gn/packages/riscv.scm: Import (gn packages fpga), (gnu packages
virtualization), (guix build utils), (guix build-system gnu), (guix
gexp) and (guix licenses).
(cva6): New variable.
| Arun Isaac |
| 2022-05-02 | gn: Add verilator-4.110....* gn/packages/fpga.scm: New file.
| Arun Isaac |
| 2022-04-20 | Remove upstreamed packages | Efraim Flashner |
| 2022-04-20 | gn: Add wfa2-lib-static. | Efraim Flashner |
| 2022-04-20 | gn: wfa2-lib: Install headers. | Efraim Flashner |
| 2022-04-20 | gn: skribilo-with-gemtext-reader: Update to 0.9.5-1.621eb19....* gn/packages/gemini.scm (skribilo-with-gemtext-reader): Rename to
skribilo-latest and switch to the latest commit on the master branch.
(tissue)[propagated-inputs]: Replace skribilo-with-gemtext-reader with
skribilo-latest.
| Arun Isaac |
| 2022-04-19 | gn: Add wfa2-lib. | Efraim Flashner |
| 2022-04-15 | gn: tissue: Set absolute path to guile, not git, in shebang....* gn/packages/gemini.scm (tissue)[arguments]: In the custom
patch-source-shebangs phase, set the absolute path to guile, not git,
in the shebang.
| Arun Isaac |
| 2022-04-15 | gn: tissue: Set absolute path to guile in shebang....* gn/packages/gemini.scm (tissue)[arguments]: Replace the
patch-source-shebangs phase with a custom one.
| Arun Isaac |
| 2022-04-14 | notebooks: add cl-nb | jgart |
| 2022-04-14 | notebooks: move nb-upload | jgart |
| 2022-04-14 | nb-upload: update to b285302 | jgart |
