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10 daysgn-uploader: Upgrade to commit 64c404e.Frederick Muriuki Muriithi
10 daysgn-auth: upgrade to commit 073395f.Frederick Muriuki Muriithi
10 daysgn-guile: Update gn-guile.•••* gn/packages/guile.scm: Import guile-lmdb and guile-lib. (gn-guile): Update to 169d26710c978484f8e9464a95be6eaa47fa704e. Also, make lmdb-publishdata-export script executable. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
10 daysgn: genenetwork2: Add javascript-xterm, javascript-xterm-style.•••* gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add javascript-xterm, javascript-xterm-style. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Alexander_Kabui
10 daysgn: javascript: Update javascript-xterm, javascript-xterm-style.•••* gn/packages/javascript.scm (javascript-xterm): Update to 5.3.0 * gn/packages/javascript.scm (javascript-xterm-style): Update to 5.3.0 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Alexander_Kabui
12 daysgn: pggb: Use wfmash-0.14 instead of the latest wfmash.•••* gn/packages/bioinformatics.scm (pggb)[inputs]: Replace wfmash with wfmash-0.14. Arun Isaac
12 daysgn: Add wfmash-0.14.•••* gn/packages/bioinformatics.scm (wfmash-0.14): New variable. Arun Isaac
2025-02-11gn: pggb: Update to 0.7.2.•••* gn/packages/bioinformatics.scm (pggb): Update to 0.7.2. Arun Isaac
2025-02-11gn: pggb: Remove unused dependencies.•••These dependencies are referred to in the documentation and put into the Docker image, but are not actually used by pggb. * gn/packages/bioinformatics.scm (pggb)[inputs]: Remove fastix, mummer, pafplot and vcflib. Arun Isaac
2025-02-11gn: odgi: Disable tests.•••* gn/packages/bioinformatics.scm (odgi): Disable tests. Arun Isaac
2025-02-10gn-guile: Make dependencies available in profile after buildFrederick Muriuki Muriithi
2025-02-10genenetwork2: Upgrade to commit 4f9a46e.Frederick Muriuki Muriithi
2025-02-04gn-uploader: Upgrade to commit d8b58c3.Frederick Muriuki Muriithi
2025-02-03gn-auth: upgrade to commit 8e64f7f.Frederick Muriuki Muriithi
2025-02-03gn-auth: upgrade to commit eec8128.Frederick Muriuki Muriithi
2025-01-29gn-uploader: upgrade to commit 8ab53c9.Frederick Muriuki Muriithi
2025-01-29gn-uploader: Upgrade to commit 848bd53.Frederick Muriuki Muriithi
2025-01-29gn-uploader: Add javascript-datatables as a dependency.Frederick Muriuki Muriithi
2025-01-28gn-uploader: Bump up commit to b7d4263.Frederick Muriuki Muriithi
2025-01-28gn-uploader: Upgrade to version 0.1.0 and commit cb57ff0e.•••We are gaining some stability at this point, so we raise the minor version. Also mark the commit for the demo. Frederick Muriuki Muriithi
2025-01-26Genenetwork3: upgrade to commit 0d902ec.Frederick Muriuki Muriithi
2025-01-25Genenetwork2: Upgrade to commit 314c6d5.Frederick Muriuki Muriithi
2025-01-25gnu: r-rrbgen: Fix name typo.•••* gn/packages/bioinformatics.scm (r-rrbgen)[name]: Fix typo. Arun Isaac
2025-01-22genenetwork2: Upgrade to commit 0db8dca.•••Fixes bug with the registration page. Frederick Muriuki Muriithi
2025-01-21gn-libs: upgrade to commit 72a95f8.Frederick Muriuki Muriithi
2025-01-20gn-auth: Upgrade to e345a04.Frederick Muriuki Muriithi
2025-01-20Genenetwork3: Upgrade to commit 5d2aebb.Frederick Muriuki Muriithi
2025-01-20Genenetwork2: Upgrade to commit 6d4d48e.Frederick Muriuki Muriithi
2025-01-10genenetwork2: upgrade to commit 798d3c6.Frederick Muriuki Muriithi
2025-01-10gn-auth: upgrade to commit 877a7a3.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit c450890.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit 854639b.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit dc606f3.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit 236a488.Frederick Muriuki Muriithi
2025-01-07genenetwork2: upgrade to commit 9bdc8ca.Frederick Muriuki Muriithi
2025-01-07genenetwork2: update to commit 7e6bfe4.Frederick Muriuki Muriithi
2025-01-07genenetwork2: upgrade to commit 8bf483a.Frederick Muriuki Muriithi
2025-01-07genenetwork2: Upgrade to commit 125c436.Frederick Muriuki Muriithi
2025-01-07genenetwork2: Upgrade to commit 93dd7f7•••This is to help troubleshoot the refresh token process and identify causes of failures. Frederick Muriuki Muriithi
2025-01-07genenetwork3: Add coreutils-minimal to genenetwork3.•••* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add coreutils-minimal. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2025-01-06genenetwork2: upgrade to commit 55da580.Frederick Muriuki Muriithi
2025-01-06gn-guile: Patch "git -C" with correct git path.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2025-01-06gn-guile: Add missing quotes around patche "git" command.•••* gn/packages/guile.scm: (gn-guile): Add missing quotes around "git" command. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2025-01-06gn-guile: Patch "git" in web/view/markdown.scm.•••* gn/packages/guile.scm: Import git-minimal. (gn-guile): Patch git-minimal in web/view/markdown.scm. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2025-01-03gn-auth: upgrade to 788953b.Frederick Muriuki Muriithi
2025-01-03genenetwork2: upgrade to a08d766Frederick Muriuki Muriithi
2025-01-02genenetwork3: upgrade to commit f9f7521.Frederick Muriuki Muriithi
2025-01-02genenetwork3: upgrade to commit a6ba760.Frederick Muriuki Muriithi
2024-12-18Substitute "guile" command with path from the store.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-12-17Update gn-guile script.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi