| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-03-05 | genenetwork2: Update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-04 | genenetwork2: Update commit and hash to build with missing templates | Frederick Muriuki Muriithi | |
| 2024-03-03 | gn: xterm: comment out xterm.js package because of suspect sources - the ↵ | pjotrp | |
| hash value changed. Also needs fixing of the code that uses it in gn2. * gn/packages/genenetwork.scm (xterm.js): Comment out packages | |||
| 2024-03-02 | gn-auth: Update the commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-01 | gn: gn-auth: Update to commit 8a20071. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth): Update to commit 8a20071. | |||
| 2024-02-26 | gn: gn-auth: Update to commit 10ec3b1. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth): Update to commit 10ec3b1. | |||
| 2024-02-26 | gn: gn-auth: Use list-style inputs. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth)[native-inputs, propagated-inputs]: List them directly instead of using an association list. | |||
| 2024-02-15 | gn: javascript: Add javascript-uikit. | Alexander_Kabui | |
| * gn/packages/javascript.scm: (javascript-uikit): New package. * gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]:Add javascript-uikit. | |||
| 2024-01-03 | gnqc-py: Fix syntax error. | Frederick Muriuki Muriithi | |
| 2024-01-03 | gn: genenetwork2: Update to 3.11-4.c1d377e. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Update to 3.11-4.c1d377e. | |||
| 2024-01-03 | gn: genenetwork3: Update to 0.1.0-5.6bb4a5f. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork3): Update to 0.1.0-5.6bb4a5f. | |||
| 2024-01-02 | gn: genenetwork2: Fix path to installed bundled fonts. | Arun Isaac | |
| 2024-01-02 | gn: genenetwork2: Install bundled fonts. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2)[arguments]: Add install-bundled-fonts and fix-font-paths phases. | |||
| 2024-01-02 | gn: genenetwork2: Use G-expressions. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Use G-expressions. | |||
| 2024-01-02 | Remove genenetwork3 return. | Arun Isaac | |
| This was introduced accidentally in 7a4bf91e019fe084f92a90535cbfffb7c119b9a7. * gn/packages/genenetwork.scm: Remove genenetwork3 return. | |||
| 2024-01-02 | gn: genenetwork2: Update to 3.11-3.ff67963. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Update to 3.11-3.ff67963. | |||
| 2024-01-02 | gn: genenetwork2: Substitute new path to default_settings.py. | Arun Isaac | |
| 2024-01-02 | gnqc-py: New package | Frederick Muriuki Muriithi | |
| 2023-12-29 | gn: genenetwork3: Update to 0.1.0-4.093163e. | Arun Isaac | |
| 2023-12-05 | gn-auth: add flask-cors dependency. | Frederick Muriuki Muriithi | |
| 2023-12-05 | gn-auth: Remove bcrypt dependency | Frederick Muriuki Muriithi | |
| 2023-10-27 | Update dependencies: genenetwork3 and gn-auth | Frederick Muriuki Muriithi | |
| * genenetwork3: Remove `yoyo-migrations` as a dependency * gn-auth: Use the upstream `yoyo-migrations` * Remove temporary local definition for yoyo-migrations. | |||
| 2023-10-06 | genenetwork3: Add python-pyld to propagated-inputs. | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add python-ld. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-27 | gn-auth: Fix missing import | Frederick Muriuki Muriithi | |
| 2023-09-27 | gn-auth: List packages to install | Frederick Muriuki Muriithi | |
| List all packages to install to hopefully fix failure in `sanity-check` phase. | |||
| 2023-09-27 | gn-auth: Use newer setup.py | Frederick Muriuki Muriithi | |
| Use updated setup.py to try and fix issues with the `sanity-check` phase. | |||
| 2023-09-27 | gn-auth: Use upstream python-mypy | Frederick Muriuki Muriithi | |
| 2023-09-27 | gn-auth: Update commit and hash | Frederick Muriuki Muriithi | |
| * Update the commit hash and the hash of the files after updating the guix-bioinformatics channel configurations for the gn-auth channel. | |||
| 2023-09-27 | gn-auth: Update commit and hash. | Frederick Muriuki Muriithi | |
| 2023-09-25 | Delete python-mypy-0.981. | Munyoki Kilyungi | |
| * gn/packages/python.scm (python-mypy-0.981): Delete it. * gn/packages/genenetwork.scm (genenetwork3)[native-inputs]: Replace python-mypy-0.981 with upstream's python-mypy. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-20 | gn: genenetwork2: Add htmx. | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add htmx. | |||
| 2023-09-06 | gn: gn-auth: Update yoyo and mypy | Frederick Muriuki Muriithi | |
| Update yoyo and mypy to allow the use of Python-3.10 | |||
| 2023-09-05 | gn: genenetwork: Update mypy and yoyo | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm: Import (guix packages). (genenetwork3): Use yoyo-migrations v8.2.0 and python-mypy v0.981. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-05 | Adjust how native/propagated inputs are defined for GN3 | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-09-04 | Revert "Pin python to python@3.8.5" | Munyoki Kilyungi | |
| This reverts commit aaa6e53e7b623105d05e67e95186aba5b4671010. | |||
| 2023-09-04 | Pin python to python@3.8.5 | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm: (genenetwork3, genenetwork2): Using python@3.8.5 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-08-31 | Move gn-auth to (gn packages genenetwork). | Arun Isaac | |
| 2023-07-05 | gn: genenetwork3: Update to 0.1.0-3.f52247c. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork3): Update to 0.1.0-3.f52247c. | |||
| 2023-07-05 | Run genenetwork3 tests using pytest. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork3)[arguments]: Replace check phase to use pytest. | |||
| 2023-06-18 | Remove unused twint from GN2 | pjotrp | |
| 2023-04-19 | gn: Update GN2 to 3.11-2.bfe557dc | Frederick Muriuki Muriithi | |
| 2023-04-19 | gn: Update GN3 to 0.1.0-2.85610fc9 | Frederick Muriuki Muriithi | |
| 2023-03-08 | gn: genenetwork3: Add python-argon-cffi | Frederick Muriuki Muriithi | |
| As part of improving the security of passwords, this commit adds python-argon-cffi that enables use of the better Argon2 password hashing algorithm, rather than the dated bcrypt that is a tad vulnerable to offline cracking. | |||
| 2023-03-02 | genenetwork3: New dependency (python-email-validator) | Frederick Muriuki Muriithi | |
| * gn/packages/genenetwork.scm: (python-email-validator): New dependency | |||
| 2022-12-28 | gn: (genenetwork2): Add python-authlib as a dependency | Frederick Muriuki Muriithi | |
| * gn/packages/genenetwork.scm: (python-authlib): New dependency | |||
| 2022-12-28 | gn: (genenetwork2): Add flask-session as a dependency | Frederick Muriuki Muriithi | |
| Flask session already handles a lot of the house-keeping involved with server-side sessions: this commit adds it as a dependency to avoid having to do the house-keeping manually. * gn/packages/genenetwork.scm: (python-flask-session): New dependency | |||
| 2022-12-23 | Disable pingouin tests | Pjotr Prins | |
| 2022-12-23 | Making the build work for genenetwork | Pjotr Prins | |
| 2022-12-20 | gn: (genenetwork3): Add dependency | Frederick Muriuki Muriithi | |
| * gn/packages/genenetwork.scm (genenetwork3): Add python-authlib as a dependency to genenetwork3 | |||
| 2022-12-06 | gn: (genenetwork3): Update to 0.1.0-2.e781996 | Frederick Muriuki Muriithi | |
| * gn/packages/genenetwork.scm (genenetwork3): Update to version 0.1.0-2.e781996 | |||
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
| aboutsummaryrefslogtreecommitdiff |