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| author | Pjotr Prins | 2022-12-23 13:45:09 -0600 |
|---|---|---|
| committer | Pjotr Prins | 2022-12-23 13:45:09 -0600 |
| commit | 256a8af21602d23da0e05ef154789b3cef88c32d (patch) | |
| tree | f75fc8d98221779218e34f6af93b5b057288b3d3 /gn/packages/genenetwork.scm | |
| parent | f7293193cbc5f58a74d5f38fe91e4774c7554635 (diff) | |
| download | guix-bioinformatics-256a8af21602d23da0e05ef154789b3cef88c32d.tar.gz | |
Disable pingouin tests
Diffstat (limited to 'gn/packages/genenetwork.scm')
| -rw-r--r-- | gn/packages/genenetwork.scm | 12 |
1 files changed, 10 insertions, 2 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index f0d1f09..49af8da 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -43,9 +43,7 @@ #:use-module (gnu packages statistics) #:use-module (gnu packages textutils) #:use-module (gnu packages version-control) - ; #:use-module (gnu packages vim) #:use-module (gnu packages web) - ; #:use-module (gnu packages wget) #:use-module (gnu packages xml) #:use-module (gn packages bioinformatics) #:use-module (gn packages crates-io) @@ -103,6 +101,15 @@ (description "Reimplementation of genenetwork/QTLReaper in Rust") (license #f)))) +; Tests on the upstream python-pengouin package are broken. So, we +; create this temporary workaround. +(define python-pingouin-without-tests + (package + (inherit python-pingouin) + (arguments + (substitute-keyword-arguments (package-arguments python-pingouin) + ((#:tests? _ #f) #f))))) + (define-public genenetwork3 (let ((commit "e781996b952bc1ff9d9cd7703cb5e37e2a282162")) (package @@ -142,6 +149,7 @@ python-numpy python-pandas ;; python-pingouin << build failing + python-pingouin-without-tests python-plotly python-scikit-learn python-pymonad |