| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-03-05 | genenetwork2: Fix commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-05 | genenetwork2: Update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-04 | genenetwork2: Update commit and hash to build with missing templates | Frederick Muriuki Muriithi | |
| 2024-03-03 | gn: xterm: comment out xterm.js package because of suspect sources - the ↵ | pjotrp | |
| hash value changed. Also needs fixing of the code that uses it in gn2. * gn/packages/genenetwork.scm (xterm.js): Comment out packages | |||
| 2024-03-02 | gn-auth: Update the commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-01 | gn: gn-auth: Update to commit 8a20071. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth): Update to commit 8a20071. | |||
| 2024-02-29 | Fix Globus CLI description. | Arun Isaac | |
| 2024-02-29 | gnu: Add globus-cli. | Arun Isaac | |
| * gn/packages/globus.scm (globus-cli): New variable. | |||
| 2024-02-29 | gnu: Add python-click-type-test. | Arun Isaac | |
| * gn/packages/globus.scm (python-click-type-test): New variable. | |||
| 2024-02-29 | gn: Add python-globus-sdk. | Arun Isaac | |
| * gn/packages/globus.scm (python-globus-sdk): New variable. | |||
| 2024-02-29 | gn: crates-io: Import (gnu packages crates-windows) for rust-dunce-1. | Arun Isaac | |
| 2024-02-28 | Upgrade guix channel to aeaa390. | Arun Isaac | |
| 2024-02-26 | gn: gn-auth: Update to commit 10ec3b1. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth): Update to commit 10ec3b1. | |||
| 2024-02-26 | gn: gn-auth: Use list-style inputs. | Arun Isaac | |
| * gn/packages/genenetwork.scm (gn-auth)[native-inputs, propagated-inputs]: List them directly instead of using an association list. | |||
| 2024-02-23 | gn: bioinformatics: Import (guix build-system r). | Arun Isaac | |
| 2024-02-23 | gn: Add r-stitch. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (r-stitch): New variable. | |||
| 2024-02-23 | gn: Add vcfpp. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (vcfpp): New variable. | |||
| 2024-02-23 | gn: Add seqlib. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (seqlib): New variable. | |||
| 2024-02-23 | gn: Add r-rrbgen. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (r-rrbgen): New variable. | |||
| 2024-02-23 | Upgrade guix channel to e7990b1. | Arun Isaac | |
| 2024-02-22 | gn: Add ocaml4.07-gsl-1. | Arun Isaac | |
| ocaml4.07-gsl-1 has been removed from upstream Guix. * gn/packages/ocaml.scm (ocaml4.07-gsl-1): New variable. | |||
| 2024-02-22 | Upgrade guix channel to 58233e6. | Arun Isaac | |
| 2024-02-15 | Bump down font-awesome to v4.7.0. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-font-awesome): Update to v4.7.0 which is the exact version we use in the genenetwork website. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-02-15 | gn: javascript: Add javascript-uikit. | Alexander_Kabui | |
| * gn/packages/javascript.scm: (javascript-uikit): New package. * gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]:Add javascript-uikit. | |||
| 2024-02-01 | gn: Update javascript-ckeditor. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-ckeditor): Copy entire directory structure of ckeditor to the store. ckeditor.js requires some CSS and other js files in the unzipped source to be able to be fully functional. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-01-03 | gnqc-py: Fix syntax error. | Frederick Muriuki Muriithi | |
| 2024-01-03 | gn: genenetwork2: Update to 3.11-4.c1d377e. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Update to 3.11-4.c1d377e. | |||
| 2024-01-03 | gn: genenetwork3: Update to 0.1.0-5.6bb4a5f. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork3): Update to 0.1.0-5.6bb4a5f. | |||
| 2024-01-02 | gn: genenetwork2: Fix path to installed bundled fonts. | Arun Isaac | |
| 2024-01-02 | gn: genenetwork2: Install bundled fonts. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2)[arguments]: Add install-bundled-fonts and fix-font-paths phases. | |||
| 2024-01-02 | gn: genenetwork2: Use G-expressions. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Use G-expressions. | |||
| 2024-01-02 | Remove genenetwork3 return. | Arun Isaac | |
| This was introduced accidentally in 7a4bf91e019fe084f92a90535cbfffb7c119b9a7. * gn/packages/genenetwork.scm: Remove genenetwork3 return. | |||
| 2024-01-02 | gn: genenetwork2: Update to 3.11-3.ff67963. | Arun Isaac | |
| * gn/packages/genenetwork.scm (genenetwork2): Update to 3.11-3.ff67963. | |||
| 2024-01-02 | gn: genenetwork2: Substitute new path to default_settings.py. | Arun Isaac | |
| 2024-01-02 | gnqc-py: New package | Frederick Muriuki Muriithi | |
| 2023-12-29 | gn: genenetwork3: Update to 0.1.0-4.093163e. | Arun Isaac | |
| 2023-12-29 | Ruby lmdb builds for ruby 2.7. We are not going to use it though | pjotrp | |
| 2023-12-05 | gn-auth: add flask-cors dependency. | Frederick Muriuki Muriithi | |
| 2023-12-05 | gn-auth: Remove bcrypt dependency | Frederick Muriuki Muriithi | |
| 2023-12-01 | roll-back on lizardfs because fuse3 issues | pjotrp | |
| 2023-11-16 | Updated lizardfs to latest version on git. | pjotrp | |
| * gn/packages/file-systems.scm (lizardfs)[arguments]: updated and disabled tests in CMake | |||
| 2023-11-16 | Added note on move to https://git.genenetwork.org/guix-bioinformatics/ | pjotrp | |
| 2023-11-13 | gn: javascript: Add javascript-ace | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-ace): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-10 | gn: javascript: Add javascript-marked-highlight. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-marked-highlight): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-10 | gn: javascript: Add javascript-marked. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-marked): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-08 | gn: lizardfs: Fix building. | Efraim Flashner | |
| * gn/packages/file-systems.scm (lizardfs)[source]: Add patch. [arguments]: Remove trailing #t from phases. [inputs]: Remove labels. Use fuse-2. * lizardfs-issues-found-on-Fedora-34-using-GCC-11.patch: New file. | |||
| 2023-11-03 | gn: javascript: Copy the right htmx.min.js from the source. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-htmx): Copy "/dist/htmx.min.js" to the targetdir. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-10-27 | Update dependencies: genenetwork3 and gn-auth | Frederick Muriuki Muriithi | |
| * genenetwork3: Remove `yoyo-migrations` as a dependency * gn-auth: Use the upstream `yoyo-migrations` * Remove temporary local definition for yoyo-migrations. | |||
| 2023-10-26 | gn: htmx: Replace minify with trivial build system. | Munyoki Kilyungi | |
| Esbuild system has no support for ES5 and will lead to a build failure with the following output: `dist/htmx.js:1979:20: error: Transforming let to the configured target environment ("es5") is not supported yet` Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-10-19 | Upgrade guix channel to 330b94e. | Arun Isaac | |
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