| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2 days | Genenetwork2: Upgrade to commit 6d4d48e. | Frederick Muriuki Muriithi | |
| 12 days | genenetwork2: upgrade to commit 798d3c6. | Frederick Muriuki Muriithi | |
| 12 days | gn-auth: upgrade to commit 877a7a3. | Frederick Muriuki Muriithi | |
| 2025-01-08 | genenetwork2: upgrade to commit c450890. | Frederick Muriuki Muriithi | |
| 2025-01-08 | genenetwork2: upgrade to commit 854639b. | Frederick Muriuki Muriithi | |
| 2025-01-08 | genenetwork2: upgrade to commit dc606f3. | Frederick Muriuki Muriithi | |
| 2025-01-08 | genenetwork2: upgrade to commit 236a488. | Frederick Muriuki Muriithi | |
| 2025-01-07 | genenetwork2: upgrade to commit 9bdc8ca. | Frederick Muriuki Muriithi | |
| 2025-01-07 | genenetwork2: update to commit 7e6bfe4. | Frederick Muriuki Muriithi | |
| 2025-01-07 | genenetwork2: upgrade to commit 8bf483a. | Frederick Muriuki Muriithi | |
| 2025-01-07 | genenetwork2: Upgrade to commit 125c436. | Frederick Muriuki Muriithi | |
| 2025-01-07 | genenetwork2: Upgrade to commit 93dd7f7 | Frederick Muriuki Muriithi | |
| This is to help troubleshoot the refresh token process and identify causes of failures. | |||
| 2025-01-07 | genenetwork3: Add coreutils-minimal to genenetwork3. | Munyoki Kilyungi | |
| * gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add coreutils-minimal. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-06 | genenetwork2: upgrade to commit 55da580. | Frederick Muriuki Muriithi | |
| 2025-01-06 | gn-guile: Patch "git -C" with correct git path. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-06 | gn-guile: Add missing quotes around patche "git" command. | Munyoki Kilyungi | |
| * gn/packages/guile.scm: (gn-guile): Add missing quotes around "git" command. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-06 | gn-guile: Patch "git" in web/view/markdown.scm. | Munyoki Kilyungi | |
| * gn/packages/guile.scm: Import git-minimal. (gn-guile): Patch git-minimal in web/view/markdown.scm. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-03 | gn-auth: upgrade to 788953b. | Frederick Muriuki Muriithi | |
| 2025-01-03 | genenetwork2: upgrade to a08d766 | Frederick Muriuki Muriithi | |
| 2025-01-02 | genenetwork3: upgrade to commit f9f7521. | Frederick Muriuki Muriithi | |
| 2025-01-02 | genenetwork3: upgrade to commit a6ba760. | Frederick Muriuki Muriithi | |
| 2024-12-18 | Substitute "guile" command with path from the store. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-17 | Update gn-guile script. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-09 | gn-libs: Upgrade to commit 66bac3d. | Frederick Muriuki Muriithi | |
| 2024-12-07 | gn-guile: Unset GUILE_LOAD_PATH from the global environment. | Munyoki Kilyungi | |
| `getenv "GUILE_LOAD_PATH"` leaks the global GUILE_LOAD_PATH into the package build. Should it return #f, a build error occurs. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-06 | Genenetwork2: Update to 9342309. | Frederick Muriuki Muriithi | |
| 2024-12-06 | GeneNetwork2: Upgrade to 2e362f7. | Frederick Muriuki Muriithi | |
| 2024-12-06 | genenetwork2: Add gn-libs as dependency. | Frederick Muriuki Muriithi | |
| 2024-12-06 | gn-libs: Upgrade to f9caab3. | Frederick Muriuki Muriithi | |
| 2024-12-04 | gn: graphaligner: Update to 1.0.20. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (graphaligner): Update to 1.0.20. [arguments]: Substitute in bamtools include directory. [inputs]: Add bamtools. | |||
| 2024-12-04 | gn: graphaligner: Use search-inputs-directory. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (graphaligner)[arguments]: Use search-inputs-directory in patch-source phase. | |||
| 2024-12-03 | gnu: vg: Update to 1.61.0. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (vg): Update to 1.61.0. [arguments]: Add #:make-flags. Create obj and lib directories, and prevent them from being deleted. Install libhandlegraph.so. | |||
| 2024-12-03 | gn: vg: Build man pages unconditionally. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (vg)[arguments]: Build man pages unconditionally in the build-manpages phase. | |||
| 2024-12-03 | gn: vg: Use G-expressions. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (vg): Use G-expressions. | |||
| 2024-12-03 | gn: vg: Remove commented-out code. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (vg)[arguments]: Remove commented-out code. | |||
| 2024-11-22 | gn-uploader: Add gn-libs as a dependency. | Frederick Muriuki Muriithi | |
| 2024-11-22 | gn-libs: Upgrade to 4d9a298. | Frederick Muriuki Muriithi | |
| 2024-11-22 | gn-auth: Upgrade to 346217b. | Frederick Muriuki Muriithi | |
| 2024-11-22 | gn-auth: Add gn-libs as a new dependency. | Frederick Muriuki Muriithi | |
| 2024-11-22 | gn-libs: Upgrade to 0.0.0-1.70f456f | Frederick Muriuki Muriithi | |
| 2024-11-21 | gn-libs: New dependencies | Frederick Muriuki Muriithi | |
| Add `python-authlib` and `python-pymonad` as new dependencies. | |||
| 2024-11-21 | gn-libs (gn packages genenetwork): New package. | Frederick Muriuki Muriithi | |
| Add a new package named "gn-libs". | |||
| 2024-11-18 | gn-guile: Upgrade to 7af301c. | Frederick Muriuki Muriithi | |
| 2024-11-14 | guile: guile3-dbi: Use %gnu-build-system-modules. | Munyoki Kilyungi | |
| *gn/packages/guile.scm (guile3-dbi)[package]{arguments} <configure-flags>: Replace %default-gnu-imported-modules% with %gnu-build-system-modules. | |||
| 2024-11-12 | GeneNetwork2: Upgrade to 32140f6 | Frederick Muriuki Muriithi | |
| 2024-11-12 | GeneNetwork3: Upgrade to 5ea318e | Frederick Muriuki Muriithi | |
| 2024-11-12 | gn: genenetwork3: Add r-qtl2. | Alexander_Kabui | |
| * gn/packages/genenetwork.scm: (genenetwork3) [propagated-inputs]: Add r-qtl2. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-11-12 | Add gn-guile. | Munyoki Kilyungi | |
| * gn/packages/guile.scm (gn-guile): New package. | |||
| 2024-11-08 | Upgrade gn-auth to 4c21d0e. | Frederick Muriuki Muriithi | |
| 2024-11-04 | Upgrade genenetwork2 to 578a8eb. | Frederick Muriuki Muriithi | |
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
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