diff options
| -rw-r--r-- | gn/packages/genenetwork.scm | 12 | ||||
| -rw-r--r-- | gn/packages/guile.scm | 9 |
2 files changed, 14 insertions, 7 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 2d1997e..cdd955f 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -115,7 +115,7 @@ ((#:tests? _ #f) #f))))) (define-public genenetwork3 - (let ((commit "a6ba760843026f6ebae44d46ec5d8edd7bad2e2d") + (let ((commit "f9f752152e9e00dbfb756d8a08c10e1892685104") (revision "5")) (package (name "genenetwork3") @@ -129,7 +129,7 @@ (file-name (git-file-name name version)) (sha256 (base32 - "03ln3d4amfmyc1f0bk6jdyjmaddji2xc31npn2s69rzm9wknv0f7")))) + "1ggc597xqj280qdp5gzlk745ldgx54k5sgn1w865ini6ph3i18zr")))) (inputs (list python-click)) (native-inputs @@ -190,7 +190,7 @@ (license license:agpl3+)))) (define-public genenetwork2 - (let ((commit "93423099638e7926ed94052f392c84250e51c5d0") + (let ((commit "55da5809d851a3c8bfa13637947b019a2c02cc93") (revision "4")) (package (name "genenetwork2") @@ -203,7 +203,7 @@ (file-name (string-append name "-" version)) (sha256 (base32 - "0jdm4jlw74bak002vl9widp5w8pbq9pwyk8sylc46rrn46inbhrw")))) + "13m4hf5v5blwipbij2j49y1sq6q2nzr42pavjf1im2n34dpjn5rh")))) (native-inputs (list graphviz)) (propagated-inputs @@ -487,7 +487,7 @@ (license license:agpl3+)))) (define-public gn-auth - (let ((commit "346217b95a4aac17a5c7ac05c00d1205fa1855c5") + (let ((commit "788953b146fd70a82da4d2bc6019387630b4db0e") (revision "01")) (package (name "gn-auth") @@ -501,7 +501,7 @@ (hash (content-hash (base32 - "0nyxml3s778zaq3r0r9z5d7010hmbzvlwdbm5xnmrzc0xlx223g3"))))) + "16xzsv6ya7bv1rxmb6r81wqfvkwdav9i5xca5l2kwabgwqlgxbdp"))))) (build-system python-build-system) (arguments (list diff --git a/gn/packages/guile.scm b/gn/packages/guile.scm index 2b6bc5b..7328397 100644 --- a/gn/packages/guile.scm +++ b/gn/packages/guile.scm @@ -11,6 +11,7 @@ #:use-module ((gnu packages compression) #:select (zlib)) #:use-module ((gnu packages perl) #:select (perl)) #:use-module ((gnu packages texinfo) #:select (texinfo)) + #:use-module ((gnu packages version-control) #:select (git-minimal)) #:use-module (guix utils) #:use-module (gnu packages build-tools) #:use-module (gnu packages package-management) @@ -137,7 +138,7 @@ for MySQL.") (inputs (list guile-3.0 guile3-dbi guile3-dbd-mysql guile-fibers guile-gnutls guile-readline guile-commonmark guile-redis openssl nss-certs gemma parallel guile-hashing - guile-json-4 bash-minimal)) + guile-json-4 bash-minimal git-minimal)) (arguments (list #:not-compiled-file-regexp "(guix|guix/.*)[.]scm$" @@ -147,6 +148,12 @@ for MySQL.") (guix build utils)) #:phases #~(modify-phases %standard-phases + (add-after 'unpack 'patch-git + (lambda* (#:key inputs #:allow-other-keys) + (let ((git (assoc-ref inputs "git-minimal"))) + (substitute* "web/view/markdown.scm" + (("\"git\"") (string-append "\"" git "/bin/git" "\"")) + (("git -C") (string-append git "/bin/git -C")))))) (add-after 'build 'install-script (lambda* _ (let* ((bash #$(this-package-input "bash-minimal")) |