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authorjgart2022-03-01 14:32:59 -0500
committerjgart2022-03-01 14:32:59 -0500
commitce322cb242b14e7d84b1f9964334805f56cc64df (patch)
tree89535adff561ac23c38e4f902275861e2334693b /gn
parentf9d9127566c84b20efd8358b2e5cfa042a8729a8 (diff)
downloadguix-bioinformatics-ce322cb242b14e7d84b1f9964334805f56cc64df.tar.gz
packages: lisp: add cl-qc
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/lisp.scm41
1 files changed, 41 insertions, 0 deletions
diff --git a/gn/packages/lisp.scm b/gn/packages/lisp.scm
index 50ef3b5..76c51f3 100644
--- a/gn/packages/lisp.scm
+++ b/gn/packages/lisp.scm
@@ -267,3 +267,44 @@ generators.")
(define-public ecl-scribble
(sbcl-package->ecl-package sbcl-scribble))
+(define-public sbcl-qc
+ (let ((commit "3d5d3bd49f7852fae6be7094ce47c7bb5241f17c")
+ (revision "0"))
+ (package
+ (name "sbcl-qc")
+ (version (git-version "20220301" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://git.genenetwork.org/jgart/cl-qc")
+ (commit commit)))
+ (sha256
+ (base32 "1041p1541fdimw9i9kxsp6sybn74niyrshy7075is98l01pmwxlx"))
+ (file-name (git-file-name name commit))))
+ (build-system asdf-build-system/sbcl)
+ (arguments
+ `(#:asd-files '("qc.asd")))
+ (native-inputs
+ (list sbcl-1am))
+ (inputs
+ (list sbcl-alexandria
+ sbcl-split-sequence))
+ (home-page "https://gitlab.common-lisp.net/frideau/qc")
+ (synopsis "Quality control of delimited data")
+ (description
+"@code{cl-qc} is a Common Lisp library for linting about the following
+in delimited text files:
+@itemize
+@item Whitespace
+@item Floating-point number well-formedness
+@item GeneChip Platform ID checks for Affymetrix, Illumina, and others
+@end itemize\n")
+ (license license:llgpl))))
+
+(define-public cl-qc
+ (sbcl-package->cl-source-package sbcl-qc))
+
+(define-public ecl-qc
+ (sbcl-package->ecl-package sbcl-qc))
+