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authorArun Isaac2021-11-16 16:07:35 +0530
committerArun Isaac2021-11-16 16:07:35 +0530
commit814c2bf2f4b9db13b2aef7e7e8b8aebc469bbc6d (patch)
tree1a06958d7f90791a5f786f1661426c3f674bb779 /gn
parent3d0ee1918c398c01e30f8f7f89357797dea20a69 (diff)
downloadguix-bioinformatics-814c2bf2f4b9db13b2aef7e7e8b8aebc469bbc6d.tar.gz
gn: python-sparqlwrapper: Remove package.
python-sparqlwrapper has been upstreamed. * gn/packages/python.scm (python-sparqlwrapper): Delete variable.
Diffstat (limited to 'gn')
-rw-r--r--gn/packages/python.scm38
1 files changed, 0 insertions, 38 deletions
diff --git a/gn/packages/python.scm b/gn/packages/python.scm
index 3793b01..76b4ec9 100644
--- a/gn/packages/python.scm
+++ b/gn/packages/python.scm
@@ -1245,44 +1245,6 @@ handles recursion and lists.")
"A tool to create Python classes that represent JSON objects defined in JSG.")
(license license:asl2.0)))
-(define-public python-sparqlwrapper
- (package
- (name "python-sparqlwrapper")
- (version "1.8.5")
- (source
- (origin
- (method url-fetch)
- (uri (pypi-uri "SPARQLWrapper" version))
- (sha256
- (base32
- "0g7va1l37iq96abqqn6b4a6sjxxh5m3h1svsw1h1c56siidnp9nn"))))
- (build-system python-build-system)
- (arguments
- '(#:tests? #f ; 2to3 doesn't quite do it for the test suite.
- #:phases
- (modify-phases %standard-phases
- (replace 'check
- (lambda* (#:key tests? #:allow-other-keys)
- (if tests?
- (begin ;; from run_tests_py3.sh
- (invoke "2to3" "-wn" "--no-diffs" "test")
- (substitute* "test/wrapper_test.py"
- (("urllib2._opener") "urllib.request._opener"))
- (setenv "PYTHONPATH"
- (string-append "SPARQLWrapper:"
- (getenv "PYTHONPATH")))
- (invoke "nosetests"))
- #t))))))
- (propagated-inputs
- `(("python-rdflib" ,python-rdflib)))
- (native-inputs
- `(("python-nose" ,python-nose)))
- (home-page "https://rdflib.dev/sparqlwrapper/")
- (synopsis "SPARQL Endpoint interface to Python")
- (description
- "THis package provides a SPARQL Endpoint interface to Python.")
- (license license:w3c)))
-
(define-public python-sparql-slurper
(package
(name "python-sparql-slurper")