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| author | jgart | 2022-04-06 11:47:42 -0400 |
|---|---|---|
| committer | jgart | 2022-04-06 11:54:52 -0400 |
| commit | 0f9ab7d8d63241fb99d5823ee3f0112246eda00e (patch) | |
| tree | 125533409883a6e06ec11cdf0af7c1fc60af3479 /gn | |
| parent | b030b089f26f31ff06aa14788820a2b9a25e85b7 (diff) | |
| download | guix-bioinformatics-0f9ab7d8d63241fb99d5823ee3f0112246eda00e.tar.gz | |
quality-control: add WIP sbcl-qc-uploads package
Diffstat (limited to 'gn')
| -rw-r--r-- | gn/packages/quality-control.scm | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/gn/packages/quality-control.scm b/gn/packages/quality-control.scm index dd3c779..884a7b9 100644 --- a/gn/packages/quality-control.scm +++ b/gn/packages/quality-control.scm @@ -79,3 +79,49 @@ delimited text files: (sbcl-package->ecl-package sbcl-qc)) +;; The file +;; #P"/tmp/guix-build-sbcl-qc-uploads-20220301-0.76f870e.drv-0/source/strains.csv" +;; does not exist: +;; No such file or directory +#;(define-public sbcl-qc-uploads + (let ((commit "76f870efad964bf680bf633e272094082008e69c") + (revision "0")) + (package + (name "sbcl-qc-uploads") + (version (git-version "20220301" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://git.genenetwork.org/jgart/qc-uploads") + (commit commit))) + (sha256 + (base32 "1nzcdqjwh1xpr92d01fvlmdysxizyklaid10zrxbi12jmdydapil")) + (file-name (git-file-name name commit)))) + (build-system asdf-build-system/sbcl) + ;; needs install-file for strains.tsv. This require more testing. + ;; todo: see for an example: https://github.com/interactive-ssr/issr-server/blob/master/guix.scm#L46 + (arguments + `(#:tests? #f ; There are no tests yet. + #:asd-files '("qc-uploads.asd"))) + (inputs + (list sbcl-alexandria + sbcl-ningle + sbcl-clack + sbcl-cl-css + sbcl-cl-who + sbcl-cl-fad + sbcl-qc ; packaged in guix-bioinformatics + sbcl-woo)) + (home-page "https://git.genenetwork.org/jgart/qc-uploads/") + (synopsis "Web UI for qc") + (description +"@code{qc-uploads} provides a web UI for @code{qc}.") + (license license:expat)))) + +#;(define-public cl-qc-uploads + (sbcl-package->cl-source-package sbcl-qc-uploads)) + +#;(define-public ecl-qc-uploads + (sbcl-package->ecl-package sbcl-qc-uploads)) + |