aboutsummaryrefslogtreecommitdiff
path: root/gn/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorEfraim Flashner2022-07-29 02:08:00 +0300
committerEfraim Flashner2022-07-29 02:12:14 +0300
commit57ba3dac9c697df3ff84d9e86d91b66566bc01d8 (patch)
treef8101b7296415343165f9d034452a1f9f06abf7e /gn/packages/bioinformatics.scm
parent0de2d3fbf365a63d4158c89432886aa9b95f12cc (diff)
downloadguix-bioinformatics-57ba3dac9c697df3ff84d9e86d91b66566bc01d8.tar.gz
gnu: pplacer: Fix building.
* gn/packages/ocaml.scm (ocaml4.07-lwt-5.5.0): New variable. (build-with-ocaml4.07): New procedure. * gn/packages/bioinformatics.scm (pplacer): Wrap with build-with-ocaml4.07.
Diffstat (limited to 'gn/packages/bioinformatics.scm')
-rw-r--r--gn/packages/bioinformatics.scm4
1 files changed, 3 insertions, 1 deletions
diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm
index 8a6de69..2055785 100644
--- a/gn/packages/bioinformatics.scm
+++ b/gn/packages/bioinformatics.scm
@@ -21,6 +21,7 @@
#:use-module (gnu packages)
#:use-module (gn packages crates-io)
#:use-module (gn packages java)
+ #:use-module (gn packages ocaml)
#:use-module (gn packages python)
#:use-module (gn packages twint)
#:use-module (gnu packages algebra)
@@ -2661,6 +2662,7 @@ protein alignments and syntenic genomic alignments.")
(define-public pplacer
(let ((commit "807f6f3"))
+ (build-with-ocaml4.07
(package
(name "pplacer")
;; The commit should be updated with each version change.
@@ -2774,7 +2776,7 @@ reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.")
(home-page "https://matsen.fhcrc.org/pplacer/")
- (license license:gpl3))))
+ (license license:gpl3)))))
(define-public python2-biopython
(python2-package python-biopython))