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| author | Pjotr Prins | 2024-04-03 06:14:59 -0500 |
|---|---|---|
| committer | Pjotr Prins | 2024-04-03 06:14:59 -0500 |
| commit | 6303fe046b944a380704eb02144cca777fee689b (patch) | |
| tree | 2fba0d38c08e9151a76f85f4332e1a94d378b36d | |
| parent | 65cb368fe12bd2604d6f36d5d50404ac58d08673 (diff) | |
| download | guix-bioinformatics-6303fe046b944a380704eb02144cca777fee689b.tar.gz | |
genenetwork3-stable: modify files that use R scripts
| -rw-r--r-- | gn/packages/genenetwork.scm | 11 |
1 files changed, 8 insertions, 3 deletions
diff --git a/gn/packages/genenetwork.scm b/gn/packages/genenetwork.scm index 4ceac43..c404c53 100644 --- a/gn/packages/genenetwork.scm +++ b/gn/packages/genenetwork.scm @@ -348,7 +348,7 @@ (license license:agpl3+)))) (define-public genenetwork3-stable - (let ((commit "8414f1d74f6b09205d3cfd09240c787323474626") + (let ((commit "d8203aaa523895fd8b1ff6cc124f2e8a53932a07") (revision "1")) (package (inherit genenetwork3) @@ -361,9 +361,14 @@ #~(modify-phases %standard-phases (add-before 'build 'update-paths (lambda _ - (substitute* "gn3/api/rqtl.py" + (for-each (lambda (fn) + (substitute* (string-append "gn3/" fn) (("scripts/") - (string-append #$output "/scripts/"))))) + (string-append #$output "/scripts/")))) + '("api/rqtl.py" + "computations/wgcna.py" + "computations/ctl.py" + "api/general.py")))) (add-before 'install 'install-scripts (lambda _ (begin |