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| author | pjotrp | 2026-04-13 12:28:05 +0200 |
|---|---|---|
| committer | pjotrp | 2026-04-13 12:28:05 +0200 |
| commit | 5a671321e0396b05756ad63e7eb98feab7eba7c6 (patch) | |
| tree | d49a154288d9bd93e1ccb40a20a1704e25a9063a | |
| parent | 265eabc986fb7261a13af726d871b8e44c344000 (diff) | |
| download | guix-bioinformatics-5a671321e0396b05756ad63e7eb98feab7eba7c6.tar.gz | |
README: add --tune=native switch
| -rw-r--r-- | README.org | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/README.org b/README.org index 2ab2229..94e9525 100644 --- a/README.org +++ b/README.org @@ -23,7 +23,7 @@ To easily use the packages from this repo, simply add it to your `channels` list and run /guix pull/ like normal to update your software. E.g. #+BEGIN_SRC sh - guix pull --url=https://codeberg.org/guix/guix -p ~/opt/guix-b0fa1dc --commit=b0fa1dc --channels=channels.scm + guix pull --url=https://codeberg.org/guix/guix -p ~/opt/guix-pull --channels=channels.scm #+END_SRC The channel file actually accesses https://git.genenetwork.org/guix-bioinformatics/tree/.guix-channel which pulls other channels and fixates the hashes. The commit hash b0fa1dc can be found from the guix you want to run with /guix -V/, it speeds up installation and makes it reproducible. Note that the upstream channel may override that version. @@ -32,6 +32,7 @@ The latest channel file that is used by our CI/CD you can find at https://ci.gen Channels are to maintain stability, the guix-bioinformatics channel depends on a specific commit of upstream Guix. So, it is recommended to isolate use of the guix-bioinformatics channel in a separate /guix pull/ profile, described [[https://issues.genenetwork.org/topics/guix-profiles][here]]. +You can use the --tune=native switch to optimize performance when installing pangenome tools and gemma. * Development tips |