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{%extends "phenotypes/base.html"%}
{%from "flash_messages.html" import flash_all_messages%}
{%from "populations/macro-display-population-card.html" import display_population_card%}
{%block title%}Phenotypes{%endblock%}
{%block pagetitle%}Phenotypes{%endblock%}
{%block lvl4_breadcrumbs%}
<li {%if activelink=="view-dataset"%}
class="breadcrumb-item active"
{%else%}
class="breadcrumb-item"
{%endif%}>
<a href="{{url_for('species.populations.phenotypes.view_dataset',
species_id=species.SpeciesId,
population_id=population.Id,
dataset_id=dataset.Id)}}">View Datasets</a>
</li>
{%endblock%}
{%block contents%}
{{flash_all_messages()}}
<div class="row">
<p>The basic dataset details are:</p>
<table class="table">
<thead>
<tr>
<th>Name</th>
<th>Full Name</th>
<th>Short Name</th>
</tr>
</thead>
<tbody>
<tr>
<td><a href="{{url_for('species.populations.phenotypes.view_dataset',
species_id=species.SpeciesId,
population_id=population.Id,
dataset_id=dataset.Id)}}">{{dataset.Name}}</a></td>
<td>{{dataset.FullName}}</td>
<td>{{dataset.ShortName}}</td>
</tr>
</tbody>
</table>
</div>
<div class="row">
<h2>Phenotype Data</h2>
<p>This dataset has a total of {{phenotype_count}} phenotypes.</p>
<p class="text-danger">
<span class="glyphicon glyphicon-exclamation-sign"></span>
Limit access here, according to the authorisation privileges the user has on
this dataset!</p>
<table class="table">
<thead>
<tr>
<th>#</th>
<th>Record</th>
<th>Description</th>
</tr>
</thead>
<tbody>
{%for pheno in phenotypes%}
<tr>
<td>{{pheno.sequence_number}}</td>
<td><a href="{{url_for('species.populations.phenotypes.view_phenotype',
species_id=species.SpeciesId,
population_id=population.Id,
dataset_id=dataset.Id,
xref_id=pheno['pxr.Id'])}}"
title="View phenotype details">
{{pheno.InbredSetCode}}_{{pheno["pxr.Id"]}}</a></td>
<td>{{pheno.Post_publication_description or pheno.Pre_publication_abbreviation or pheno.Original_description}}</td>
</tr>
{%else%}
<tr><td colspan="5"></td></tr>
{%endfor%}
</tbody>
</table>
</div>
{%endblock%}
{%block sidebarcontents%}
{{display_population_card(species, population)}}
{%endblock%}
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