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"""Views handling ('classical') phenotypes."""
from flask import request, Blueprint, render_template, current_app as app
from uploader.datautils import order_by_family
from uploader.authorisation import require_login
from uploader.db_utils import database_connection
from uploader.species.models import all_species, species_by_id
phenotypesbp = Blueprint("phenotypes", __name__)
@phenotypesbp.route("/phenotypes", methods=["GET"])
@require_login
def index():
"""Direct entry-point for phenotypes data handling."""
with database_connection(app.config["SQL_URI"]) as conn:
if not bool(request.args.get("species_id")):
return render_template("phenotypes/index.html",
species=order_by_family(all_species(conn)),
activelink="phenotypes")
species = species_by_id(conn, request.args.get("species_id"))
if not bool(species):
flash("No such species!", "alert-danger")
return redirect(url_for("species.populations.phenotypes.index"))
return "Would lead you to go select population…"
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