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"""Database and utility functions for phenotypes."""
from typing import Optional
import MySQLdb as mdb
from MySQLdb.cursors import DictCursor
from uploader.db_utils import debug_query
def datasets_by_population(
conn: mdb.Connection,
species_id: int,
population_id: int
) -> tuple[dict, ...]:
"""Retrieve all of a population's phenotype studies."""
with conn.cursor(cursorclass=DictCursor) as cursor:
cursor.execute(
"SELECT s.SpeciesId, pf.* FROM Species AS s "
"INNER JOIN InbredSet AS iset ON s.Id=iset.SpeciesId "
"INNER JOIN PublishFreeze AS pf ON iset.Id=pf.InbredSetId "
"WHERE s.Id=%s AND iset.Id=%s;",
(species_id, population_id))
return tuple(dict(row) for row in cursor.fetchall())
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