Age | Commit message (Expand) | Author |
---|---|---|
2025-05-12 | Use builtin functions to compute log level. | Frederick Muriuki Muriithi |
2025-05-05 | Init setup and script for async job to load phenotypes into database | Frederick Muriuki Muriithi |
2025-05-05 | Save/Create new phenotypes in the database. | Frederick Muriuki Muriithi |
2025-05-05 | Provide endpoint for loading data after QC is successful. | Frederick Muriuki Muriithi |
2025-05-05 | Include the publication when provided. | Frederick Muriuki Muriithi |
2025-04-21 | Proceed to jobs status update page. | Frederick Muriuki Muriithi |
2025-04-21 | Use module-specific logger. | Frederick Muriuki Muriithi |
2025-04-21 | Add "DataId" to top-level trait details.•••The `DataId` is unique in the `PublishXRef` table. | Frederick Muriuki Muriithi |
2025-04-14 | Fix typo. | Frederick Muriuki Muriithi |
2025-04-14 | Move common fieldnames into exportable variable. | Frederick Muriuki Muriithi |
2025-04-14 | Implement difference computations. | Frederick Muriuki Muriithi |
2025-04-14 | Add tests for new difference computation function. | Frederick Muriuki Muriithi |
2025-04-14 | Log out job command for easier debug. | Frederick Muriuki Muriithi |
2025-04-14 | Provide species, population and dataset identifiers as job metadata. | Frederick Muriuki Muriithi |
2025-03-26 | Pass in system log-level to script. | Frederick Muriuki Muriithi |
2025-03-26 | Provide connection URI for mariadb. | Frederick Muriuki Muriithi |
2025-03-26 | Update comment text. | Frederick Muriuki Muriithi |
2025-03-25 | Run job with unbuffered outputs. | Frederick Muriuki Muriithi |
2025-03-25 | Update name of launcher script used. | Frederick Muriuki Muriithi |
2025-03-24 | Begin processing the uploadeded bulk-edit file. | Frederick Muriuki Muriithi |
2025-03-21 | Add "PubMed_ID" field•••The "PubMed_ID" field allows the user to edit the publication that's attached to each phenotype trait. | Frederick Muriuki Muriithi |
2025-03-21 | Bulk Edit: Initialise the bulk-edit upload•••* Provide UI for uploading the file * Provide (partially implemented) endpoint to handle the uploaded file. | Frederick Muriuki Muriithi |
2025-03-21 | Rename endpoint: Distinguish edit download from other downloads. | Frederick Muriuki Muriithi |
2025-03-18 | Enable downloading of dataset's phenotype's data. | Frederick Muriuki Muriithi |
2025-03-17 | Include InbredSetId: Useful for querying data. | Frederick Muriuki Muriithi |
2025-02-18 | Extract common pattern into generic function. | Frederick Muriuki Muriithi |
2025-02-18 | Enable creating new populations on the "Phenotype Data" path.•••Enable creating new populations in the case where the population a user wants to use does not exist in the database. | Frederick Muriuki Muriithi |
2025-02-18 | Redirect to "Create Species" page if user selects it.•••Add the "Create Species" sub-step to the phenotype data path. | Frederick Muriuki Muriithi |
2025-02-18 | Select from searchable list and allow new species creation.•••Select the species to use from a searchable list. In case the species does not exist in the list, allow creation of the list. | Frederick Muriuki Muriithi |
2025-01-29 | Fetch all phenotypes for display with DataTables. | Frederick Muriuki Muriithi |
2025-01-29 | Update field name.•••Use "xref_id" rather than "pxr.Id" since the former is a little clearer. | Frederick Muriuki Muriithi |
2025-01-28 | Use a more robust check for emptiness.•••Some of the values could be integer values. | Frederick Muriuki Muriithi |
2025-01-28 | Fix type-checking issues. | Frederick Muriuki Muriithi |
2025-01-28 | Fix linting issues. | Frederick Muriuki Muriithi |
2025-01-28 | Update endpoint: Make it more consistent. | Frederick Muriuki Muriithi |
2025-01-27 | Show SE and N field if even one row has SE. | Frederick Muriuki Muriithi |
2025-01-27 | Fix bug in how the SE and N values for a phenotype are fetched. | Frederick Muriuki Muriithi |
2025-01-27 | Enable editing of a phenotype's numeric values. | Frederick Muriuki Muriithi |
2025-01-27 | Fix minor bug. | Frederick Muriuki Muriithi |
2025-01-27 | Implement editing of basic phenotype metadata. | Frederick Muriuki Muriithi |
2025-01-25 | Add function to retrieve a phenotype's publication data. | Frederick Muriuki Muriithi |
2025-01-25 | Add the "StrainId" field to phenotype data rows. | Frederick Muriuki Muriithi |
2025-01-24 | Provide UI for editing a specific phenotype. | Frederick Muriuki Muriithi |
2025-01-24 | Extract reusable constant. | Frederick Muriuki Muriithi |
2025-01-23 | Add publication data to page. | Frederick Muriuki Muriithi |
2025-01-23 | Only present SE and N columns if at least one row has them. | Frederick Muriuki Muriithi |
2025-01-23 | Provide summary for review before entering data to database. | Frederick Muriuki Muriithi |
2025-01-21 | Use sanitised names derived from original names. | Frederick Muriuki Muriithi |
2025-01-21 | Reuse common job-creation code. | Frederick Muriuki Muriithi |
2025-01-21 | Process form contents into a zip bundle. | Frederick Muriuki Muriithi |