| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2025-05-30 | Use full table names rather than aliases | Frederick Muriuki Muriithi | |
| Using aliases leads to errors when you have to use table locking to prevent data corruption. This commit updates queries to use the full table names rather than aliases, in order to prevent such troubles. | |||
| 2025-05-19 | Provide extra metadata to the job. | Frederick Muriuki Muriithi | |
| 2025-05-19 | Provide missing URI to the MariaDB database to the script. | Frederick Muriuki Muriithi | |
| 2025-05-19 | Add function to save the numerical data for phenotypes. | Frederick Muriuki Muriithi | |
| 2025-05-12 | Use builtin functions to compute log level. | Frederick Muriuki Muriithi | |
| 2025-05-05 | Init setup and script for async job to load phenotypes into database | Frederick Muriuki Muriithi | |
| 2025-05-05 | Save/Create new phenotypes in the database. | Frederick Muriuki Muriithi | |
| 2025-05-05 | Provide endpoint for loading data after QC is successful. | Frederick Muriuki Muriithi | |
| 2025-05-05 | Include the publication when provided. | Frederick Muriuki Muriithi | |
| 2025-04-21 | Proceed to jobs status update page. | Frederick Muriuki Muriithi | |
| 2025-04-21 | Use module-specific logger. | Frederick Muriuki Muriithi | |
| 2025-04-21 | Add "DataId" to top-level trait details. | Frederick Muriuki Muriithi | |
| The `DataId` is unique in the `PublishXRef` table. | |||
| 2025-04-14 | Fix typo. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Move common fieldnames into exportable variable. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Implement difference computations. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Add tests for new difference computation function. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Log out job command for easier debug. | Frederick Muriuki Muriithi | |
| 2025-04-14 | Provide species, population and dataset identifiers as job metadata. | Frederick Muriuki Muriithi | |
| 2025-03-26 | Pass in system log-level to script. | Frederick Muriuki Muriithi | |
| 2025-03-26 | Provide connection URI for mariadb. | Frederick Muriuki Muriithi | |
| 2025-03-26 | Update comment text. | Frederick Muriuki Muriithi | |
| 2025-03-25 | Run job with unbuffered outputs. | Frederick Muriuki Muriithi | |
| 2025-03-25 | Update name of launcher script used. | Frederick Muriuki Muriithi | |
| 2025-03-24 | Begin processing the uploadeded bulk-edit file. | Frederick Muriuki Muriithi | |
| 2025-03-21 | Add "PubMed_ID" field | Frederick Muriuki Muriithi | |
| The "PubMed_ID" field allows the user to edit the publication that's attached to each phenotype trait. | |||
| 2025-03-21 | Bulk Edit: Initialise the bulk-edit upload | Frederick Muriuki Muriithi | |
| * Provide UI for uploading the file * Provide (partially implemented) endpoint to handle the uploaded file. | |||
| 2025-03-21 | Rename endpoint: Distinguish edit download from other downloads. | Frederick Muriuki Muriithi | |
| 2025-03-18 | Enable downloading of dataset's phenotype's data. | Frederick Muriuki Muriithi | |
| 2025-03-17 | Include InbredSetId: Useful for querying data. | Frederick Muriuki Muriithi | |
| 2025-02-18 | Extract common pattern into generic function. | Frederick Muriuki Muriithi | |
| 2025-02-18 | Enable creating new populations on the "Phenotype Data" path. | Frederick Muriuki Muriithi | |
| Enable creating new populations in the case where the population a user wants to use does not exist in the database. | |||
| 2025-02-18 | Redirect to "Create Species" page if user selects it. | Frederick Muriuki Muriithi | |
| Add the "Create Species" sub-step to the phenotype data path. | |||
| 2025-02-18 | Select from searchable list and allow new species creation. | Frederick Muriuki Muriithi | |
| Select the species to use from a searchable list. In case the species does not exist in the list, allow creation of the list. | |||
| 2025-01-29 | Fetch all phenotypes for display with DataTables. | Frederick Muriuki Muriithi | |
| 2025-01-29 | Update field name. | Frederick Muriuki Muriithi | |
| Use "xref_id" rather than "pxr.Id" since the former is a little clearer. | |||
| 2025-01-28 | Use a more robust check for emptiness. | Frederick Muriuki Muriithi | |
| Some of the values could be integer values. | |||
| 2025-01-28 | Fix type-checking issues. | Frederick Muriuki Muriithi | |
| 2025-01-28 | Fix linting issues. | Frederick Muriuki Muriithi | |
| 2025-01-28 | Update endpoint: Make it more consistent. | Frederick Muriuki Muriithi | |
| 2025-01-27 | Show SE and N field if even one row has SE. | Frederick Muriuki Muriithi | |
| 2025-01-27 | Fix bug in how the SE and N values for a phenotype are fetched. | Frederick Muriuki Muriithi | |
| 2025-01-27 | Enable editing of a phenotype's numeric values. | Frederick Muriuki Muriithi | |
| 2025-01-27 | Fix minor bug. | Frederick Muriuki Muriithi | |
| 2025-01-27 | Implement editing of basic phenotype metadata. | Frederick Muriuki Muriithi | |
| 2025-01-25 | Add function to retrieve a phenotype's publication data. | Frederick Muriuki Muriithi | |
| 2025-01-25 | Add the "StrainId" field to phenotype data rows. | Frederick Muriuki Muriithi | |
| 2025-01-24 | Provide UI for editing a specific phenotype. | Frederick Muriuki Muriithi | |
| 2025-01-24 | Extract reusable constant. | Frederick Muriuki Muriithi | |
| 2025-01-23 | Add publication data to page. | Frederick Muriuki Muriithi | |
| 2025-01-23 | Only present SE and N columns if at least one row has them. | Frederick Muriuki Muriithi | |
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
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