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gn-uploader
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gn-uploader: Data uploader for GeneNetwork
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phenotypes
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views.py
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Author
3 days
Add success handler for recompute phenotypes means jobs.
Frederick Muriuki Muriithi
3 days
Enable (re)compute of phenotype means by users.
Frederick Muriuki Muriithi
5 days
Use new "redirection-to-next" utilities.
Frederick Muriuki Muriithi
5 days
Improve UI to enable editing publication details.
Frederick Muriuki Muriithi
2025-07-14
Deactivate linter error check.
Frederick Muriuki Muriithi
2025-07-14
Remove comments and demo statements.
Frederick Muriuki Muriithi
2025-07-14
Fix linting issues.
Frederick Muriuki Muriithi
2025-07-14
Fix imports
Frederick Muriuki Muriithi
2025-07-14
Refactor out common functionality into separate function.
Frederick Muriuki Muriithi
2025-07-01
Bugfix: The value needs to be a tuple or list.
Frederick Muriuki Muriithi
2025-07-01
Ignore any optional files that are not provided.
Frederick Muriuki Muriithi
2025-07-01
Remove unused feature
Frederick Muriuki Muriithi
2025-06-30
Allow independent transposition of each file
Frederick Muriuki Muriithi
2025-06-26
Narrow search to only uploaded traits.
Frederick Muriuki Muriithi
2025-06-24
Use pathlib.Path object for file paths.
Frederick Muriuki Muriithi
2025-06-17
Allow users to provide transposed files.
Frederick Muriuki Muriithi
2025-06-10
Display the success page.
Frederick Muriuki Muriithi
2025-06-10
Pass on the publication to the next job.
Frederick Muriuki Muriithi
2025-06-10
Provide handler for `load-new-phenotypes-data` jobs.
Frederick Muriuki Muriithi
2025-06-10
On success, redirect to job status check page.
Frederick Muriuki Muriithi
2025-06-10
Display the error.
Frederick Muriuki Muriithi
2025-06-10
Set loglevel for background job's launcher.
Frederick Muriuki Muriithi
2025-06-05
Request token for use with script to update authorisations
Frederick Muriuki Muriithi
2025-05-30
Add dataset_id and bundle path to job metadata.
Frederick Muriuki Muriithi
2025-05-19
Provide extra metadata to the job.
Frederick Muriuki Muriithi
2025-05-19
Provide missing URI to the MariaDB database to the script.
Frederick Muriuki Muriithi
2025-05-12
Use builtin functions to compute log level.
Frederick Muriuki Muriithi
2025-05-05
Init setup and script for async job to load phenotypes into database
Frederick Muriuki Muriithi
2025-05-05
Provide endpoint for loading data after QC is successful.
Frederick Muriuki Muriithi
2025-05-05
Include the publication when provided.
Frederick Muriuki Muriithi
2025-04-21
Proceed to jobs status update page.
Frederick Muriuki Muriithi
2025-04-14
Fix typo.
Frederick Muriuki Muriithi
2025-04-14
Move common fieldnames into exportable variable.
Frederick Muriuki Muriithi
2025-04-14
Log out job command for easier debug.
Frederick Muriuki Muriithi
2025-04-14
Provide species, population and dataset identifiers as job metadata.
Frederick Muriuki Muriithi
2025-03-26
Pass in system log-level to script.
Frederick Muriuki Muriithi
2025-03-26
Provide connection URI for mariadb.
Frederick Muriuki Muriithi
2025-03-26
Update comment text.
Frederick Muriuki Muriithi
2025-03-25
Run job with unbuffered outputs.
Frederick Muriuki Muriithi
2025-03-25
Update name of launcher script used.
Frederick Muriuki Muriithi
2025-03-24
Begin processing the uploadeded bulk-edit file.
Frederick Muriuki Muriithi
2025-03-21
Add "PubMed_ID" field
Frederick Muriuki Muriithi
2025-03-21
Bulk Edit: Initialise the bulk-edit upload
Frederick Muriuki Muriithi
2025-03-21
Rename endpoint: Distinguish edit download from other downloads.
Frederick Muriuki Muriithi
2025-03-18
Enable downloading of dataset's phenotype's data.
Frederick Muriuki Muriithi
2025-02-18
Extract common pattern into generic function.
Frederick Muriuki Muriithi
2025-02-18
Enable creating new populations on the "Phenotype Data" path.
Frederick Muriuki Muriithi
2025-02-18
Redirect to "Create Species" page if user selects it.
Frederick Muriuki Muriithi
2025-02-18
Select from searchable list and allow new species creation.
Frederick Muriuki Muriithi
2025-01-29
Fetch all phenotypes for display with DataTables.
Frederick Muriuki Muriithi
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