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gn-uploader
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gn-uploader: Data uploader for GeneNetwork
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phenotypes
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views.py
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Author
2025-05-30
Add dataset_id and bundle path to job metadata.
Frederick Muriuki Muriithi
2025-05-19
Provide extra metadata to the job.
Frederick Muriuki Muriithi
2025-05-19
Provide missing URI to the MariaDB database to the script.
Frederick Muriuki Muriithi
2025-05-12
Use builtin functions to compute log level.
Frederick Muriuki Muriithi
2025-05-05
Init setup and script for async job to load phenotypes into database
Frederick Muriuki Muriithi
2025-05-05
Provide endpoint for loading data after QC is successful.
Frederick Muriuki Muriithi
2025-05-05
Include the publication when provided.
Frederick Muriuki Muriithi
2025-04-21
Proceed to jobs status update page.
Frederick Muriuki Muriithi
2025-04-14
Fix typo.
Frederick Muriuki Muriithi
2025-04-14
Move common fieldnames into exportable variable.
Frederick Muriuki Muriithi
2025-04-14
Log out job command for easier debug.
Frederick Muriuki Muriithi
2025-04-14
Provide species, population and dataset identifiers as job metadata.
Frederick Muriuki Muriithi
2025-03-26
Pass in system log-level to script.
Frederick Muriuki Muriithi
2025-03-26
Provide connection URI for mariadb.
Frederick Muriuki Muriithi
2025-03-26
Update comment text.
Frederick Muriuki Muriithi
2025-03-25
Run job with unbuffered outputs.
Frederick Muriuki Muriithi
2025-03-25
Update name of launcher script used.
Frederick Muriuki Muriithi
2025-03-24
Begin processing the uploadeded bulk-edit file.
Frederick Muriuki Muriithi
2025-03-21
Add "PubMed_ID" field
Frederick Muriuki Muriithi
2025-03-21
Bulk Edit: Initialise the bulk-edit upload
Frederick Muriuki Muriithi
2025-03-21
Rename endpoint: Distinguish edit download from other downloads.
Frederick Muriuki Muriithi
2025-03-18
Enable downloading of dataset's phenotype's data.
Frederick Muriuki Muriithi
2025-02-18
Extract common pattern into generic function.
Frederick Muriuki Muriithi
2025-02-18
Enable creating new populations on the "Phenotype Data" path.
Frederick Muriuki Muriithi
2025-02-18
Redirect to "Create Species" page if user selects it.
Frederick Muriuki Muriithi
2025-02-18
Select from searchable list and allow new species creation.
Frederick Muriuki Muriithi
2025-01-29
Fetch all phenotypes for display with DataTables.
Frederick Muriuki Muriithi
2025-01-28
Use a more robust check for emptiness.
Frederick Muriuki Muriithi
2025-01-28
Fix type-checking issues.
Frederick Muriuki Muriithi
2025-01-28
Fix linting issues.
Frederick Muriuki Muriithi
2025-01-28
Update endpoint: Make it more consistent.
Frederick Muriuki Muriithi
2025-01-27
Show SE and N field if even one row has SE.
Frederick Muriuki Muriithi
2025-01-27
Enable editing of a phenotype's numeric values.
Frederick Muriuki Muriithi
2025-01-27
Fix minor bug.
Frederick Muriuki Muriithi
2025-01-27
Implement editing of basic phenotype metadata.
Frederick Muriuki Muriithi
2025-01-24
Provide UI for editing a specific phenotype.
Frederick Muriuki Muriithi
2025-01-24
Extract reusable constant.
Frederick Muriuki Muriithi
2025-01-23
Add publication data to page.
Frederick Muriuki Muriithi
2025-01-23
Only present SE and N columns if at least one row has them.
Frederick Muriuki Muriithi
2025-01-23
Provide summary for review before entering data to database.
Frederick Muriuki Muriithi
2025-01-21
Use sanitised names derived from original names.
Frederick Muriuki Muriithi
2025-01-21
Reuse common job-creation code.
Frederick Muriuki Muriithi
2025-01-21
Process form contents into a zip bundle.
Frederick Muriuki Muriithi
2024-12-13
Separate bundle and individual files processing
Frederick Muriuki Muriithi
2024-12-13
Use new templates:
Frederick Muriuki Muriithi
2024-12-10
Redirect if there's only a single phenotype dataset
Frederick Muriuki Muriithi
2024-12-10
Use specialised template renderer for phenotypes.
Frederick Muriuki Muriithi
2024-12-03
Display the files metadata in progress section.
Frederick Muriuki Muriithi
2024-12-03
Fix some linting and mypy issues.
Frederick Muriuki Muriithi
2024-12-03
Fetch a jobs errors from its errors lists.
Frederick Muriuki Muriithi
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