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gn-uploader: Data uploader for GeneNetwork
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2024-01-03
Use generic parser. Remove obsoleted functions.
Frederick Muriuki Muriithi
2024-01-03
Parse founder_geno files. Generalise parsing files.
Frederick Muriuki Muriithi
2024-01-03
Add tests for `founder_geno` parsing.
Frederick Muriuki Muriithi
2024-01-03
Parse the phenotype data from the R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-01-03
Extract processing of transposed files into reusable function.
Frederick Muriuki Muriithi
2024-01-02
Mark tests as unit tests.
Frederick Muriuki Muriithi
2023-12-28
Rework parsing of transposed geno files.
Frederick Muriuki Muriithi
2023-12-28
Handle transposed geno files.
Frederick Muriuki Muriithi
2023-12-27
Tests: Test parsing of non-transposed geno files.
Frederick Muriuki Muriithi
2023-12-27
Tests: Test parsing of pmap files. Merge testing of map files.
Frederick Muriuki Muriithi
2023-12-27
Tests: Add tests for parsing gmap files.
Frederick Muriuki Muriithi
2023-12-20
Provide instance_path at client creation.
Frederick Muriuki Muriithi
2023-12-20
Stop relying on "GUIX_ENVIRONMENT" envvar
Frederick Muriuki Muriithi
2023-11-24
QC: Check for only one decimal place.
Frederick Muriuki Muriithi
2023-11-15
Linting: Fix linting errors.
Frederick Muriuki Muriithi
2022-11-16
tests: Fix some failing tests
Frederick Muriuki Muriithi
2022-11-16
qc: Allow whole numbers or numbers where the decimals are all zeroes
Frederick Muriuki Muriithi
2022-08-31
Commit missing files.
Frederick Muriuki Muriithi
2022-08-31
Update test: use new script name.
Frederick Muriuki Muriithi
2022-07-07
Fix test
Frederick Muriuki Muriithi
2022-06-28
Check for inconsistent columns
Frederick Muriuki Muriithi
2022-06-22
Test zipfiles uploads: commit forgotten tests
Frederick Muriuki Muriithi
2022-06-22
Test the results pages
Frederick Muriuki Muriithi
2022-06-21
Test the progress indication feature
Frederick Muriuki Muriithi
2022-06-21
Rename fixture: fixture gives back the redis url, not a server
Frederick Muriuki Muriithi
2022-06-21
Update tests: Ensure errors return status code 400
Frederick Muriuki Muriithi
2022-06-21
Test the upload of zip files works as expected
Frederick Muriuki Muriithi
2022-06-17
Test endpoint '/parse/parse'
Frederick Muriuki Muriithi
2022-06-16
Add more UI tests
Frederick Muriuki Muriithi
2022-06-15
Setup test fixtures and initial tests for web-UI
Frederick Muriuki Muriithi
2022-06-10
Update tests: Accept zeroes as valid values
Frederick Muriuki Muriithi
2022-05-18
Remove obsoleted code. Fix linting errors.
Frederick Muriuki Muriithi
2022-05-18
Parse files with new non-exception functions
Frederick Muriuki Muriithi
2022-05-18
Return errors when found or None otherwise
Frederick Muriuki Muriithi
2022-05-02
Optimise strain names parsing
Frederick Muriuki Muriithi
2022-04-25
Advance seek_position on error
Frederick Muriuki Muriithi
2022-04-25
`take`: function to select a few items from an iterable
Frederick Muriuki Muriithi
2022-04-21
Collect all the errors
Frederick Muriuki Muriithi
2022-04-20
Update parameters for tests
Frederick Muriuki Muriithi
2022-04-20
Fix linting issues
Frederick Muriuki Muriithi
2022-04-13
Implement remaining file parsing tests
Frederick Muriuki Muriithi
2022-04-13
Add test for duplicate headers
Frederick Muriuki Muriithi
2022-04-13
Implement test for parsing that fails
Frederick Muriuki Muriithi
2022-04-13
Add tests outline for file parsing
Frederick Muriuki Muriithi
2022-04-13
Update Exception name
Frederick Muriuki Muriithi
2022-04-13
Add sample files for tests
Frederick Muriuki Muriithi
2022-04-11
Add missing `__init__.py` to prevent import errors
Frederick Muriuki Muriithi
2022-04-11
Add tests for headers
Frederick Muriuki Muriithi
2022-04-11
Implement tests and stubs for functions under test
Frederick Muriuki Muriithi
2022-04-11
Set up initial, failing tests for cell values
Frederick Muriuki Muriithi