aboutsummaryrefslogtreecommitdiff
path: root/scripts
AgeCommit message (Expand)Author
2024-01-15Initialise `install_phenos` script.Frederick Muriuki Muriithi
2024-01-15Extract common structure into separate modules.Frederick Muriuki Muriithi
2024-01-11Update pmap data in the database.Frederick Muriuki Muriithi
2024-01-11Update gmap data in the databaseFrederick Muriuki Muriithi
2024-01-11Cleanup linting and typing errors.Frederick Muriuki Muriithi
2024-01-11CLI: Require datasetid as an argument.Frederick Muriuki Muriithi
2024-01-10Provide convenience functions to avoid subtle call errorsFrederick Muriuki Muriithi
2024-01-10Cross-reference genotype data to the dataset.Frederick Muriuki Muriithi
2024-01-10Insert genotype data.Frederick Muriuki Muriithi
2024-01-10Cross-reference individuals to populations.Frederick Muriuki Muriithi
2024-01-10Insert any new individuals/samples into the database.Frederick Muriuki Muriithi
2024-01-10Insert any new markersFrederick Muriuki Muriithi
2024-01-09WIP: Install genotypes from R/qtl2 bundleFrederick Muriuki Muriithi
2024-01-09Fix linting errorsFrederick Muriuki Muriithi
2024-01-09scripts: Log to redisFrederick Muriuki Muriithi
2024-01-08Use extracted functions and fix bugsFrederick Muriuki Muriithi
2023-12-20Fix ID column keyFrederick Muriuki Muriithi
2023-12-18Samples: Hook-up external async script to upload the samples.Frederick Muriuki Muriithi
2023-12-14samples: Create external script and fix some bugs.Frederick Muriuki Muriithi
2023-11-30Bug: Fix insertion errorFrederick Muriuki Muriithi
2023-11-30Fix errors caught by pylint and mypy.Frederick Muriuki Muriithi
2023-11-15Log out DB errors even when handledFrederick Muriuki Muriithi
2023-11-15Remove debugging statement.Frederick Muriuki Muriithi
2023-11-15Bug: Insert ProbeSets before average data and cross-refsFrederick Muriuki Muriithi
2023-11-15mypy: Fix typing errors.Frederick Muriuki Muriithi
2023-11-15Linting: Fix linting errors.Frederick Muriuki Muriithi
2023-10-30Prevent overwrite. Avoid inserting same probeset multiple times.Frederick Muriuki Muriithi
2023-10-18Link to `ProbeSet.Id` in XRef TableFrederick Muriuki Muriithi
2023-10-16Fix bug: Insert ProbeSets if they do not exist.Frederick Muriuki Muriithi
2023-10-16Fix bug: Provide the platform_id to `insert_means`Frederick Muriuki Muriithi
2023-10-16Fix bug: parsing fields from query.Frederick Muriuki Muriithi
2022-08-05Update job status. Display stdout and stderr outputsFrederick Muriuki Muriithi
2022-08-04Implement data insertionFrederick Muriuki Muriithi
2022-08-04Handle stderr outputFrederick Muriuki Muriithi
2022-08-04Format queries for output. Get rid of extraneous output.Frederick Muriuki Muriithi
2022-07-19Save standard error data. Fix linting and typing errors.Frederick Muriuki Muriithi
2022-07-19Implement data insertion (averages/means)Frederick Muriuki Muriithi
2022-07-19Check connections before launchingFrederick Muriuki Muriithi
2022-07-19Add generic worker scriptFrederick Muriuki Muriithi
2022-07-19Rename file validation scriptFrederick Muriuki Muriithi
2022-07-07Replace 'magic' with builtin 'mimetypes'Frederick Muriuki Muriithi
2022-06-28Check for inconsistent columnsFrederick Muriuki Muriithi
2022-06-15Fix linting and type errorsFrederick Muriuki Muriithi
2022-06-10Enable upload of zipfilesFrederick Muriuki Muriithi
2022-06-02Enable user abortion of file parsingFrederick Muriuki Muriithi
2022-06-02Add an error display to the progress status reportFrederick Muriuki Muriithi
2022-05-19Update Web-UI: use new error collection paradigmFrederick Muriuki Muriithi
2022-05-19Extract progress indication from the parsingFrederick Muriuki Muriithi
2022-05-18Update CLI: use new error collection codeFrederick Muriuki Muriithi
2022-05-11Tag string as a python f-string to fix error display bugFrederick Muriuki Muriithi
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-22 15:11:29 +0000