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gn-uploader: Data uploader for GeneNetwork
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insert_data.py
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Author
2024-11-22
Use gn-libs code for db connection.
Frederick Muriuki Muriithi
2024-07-25
Rename module: qc_app --> uploader
Frederick Muriuki Muriithi
2024-03-29
Quiet linter.
Frederick Muriuki Muriithi
2024-03-22
Notify user if identifiers are not consistent.
Frederick Muriuki Muriithi
2024-03-22
Map names in files to names in database.
Frederick Muriuki Muriithi
2024-03-22
Fix linting issue.
Frederick Muriuki Muriithi
2024-03-20
Fix bug: correctly merge standard-error values in file to data in db
Frederick Muriuki Muriithi
2024-02-28
Fix bug: fetch from cursor, not return from cursor.execute(…)
load-raw-data-no-parsing
Frederick Muriuki Muriithi
2024-02-12
Provide better error messaging
Frederick Muriuki Muriithi
2024-01-15
Update imports: `take` was moved to different package.
Frederick Muriuki Muriithi
2023-12-20
Fix ID column key
Frederick Muriuki Muriithi
2023-11-30
Bug: Fix insertion error
Frederick Muriuki Muriithi
2023-11-30
Fix errors caught by pylint and mypy.
Frederick Muriuki Muriithi
2023-11-15
Log out DB errors even when handled
Frederick Muriuki Muriithi
2023-11-15
Remove debugging statement.
Frederick Muriuki Muriithi
2023-11-15
Bug: Insert ProbeSets before average data and cross-refs
Frederick Muriuki Muriithi
2023-11-15
mypy: Fix typing errors.
Frederick Muriuki Muriithi
2023-11-15
Linting: Fix linting errors.
Frederick Muriuki Muriithi
2023-10-30
Prevent overwrite. Avoid inserting same probeset multiple times.
Frederick Muriuki Muriithi
2023-10-18
Link to `ProbeSet.Id` in XRef Table
Frederick Muriuki Muriithi
2023-10-16
Fix bug: Insert ProbeSets if they do not exist.
Frederick Muriuki Muriithi
2023-10-16
Fix bug: Provide the platform_id to `insert_means`
Frederick Muriuki Muriithi
2023-10-16
Fix bug: parsing fields from query.
Frederick Muriuki Muriithi
2022-08-05
Update job status. Display stdout and stderr outputs
Frederick Muriuki Muriithi
2022-08-04
Format queries for output. Get rid of extraneous output.
Frederick Muriuki Muriithi
2022-07-19
Save standard error data. Fix linting and typing errors.
Frederick Muriuki Muriithi
2022-07-19
Implement data insertion (averages/means)
Frederick Muriuki Muriithi
