| Age | Commit message (Expand) | Author |
|---|---|---|
| 2024-02-12 | Provide better error messaging...Provide a better error message that can help the user figure out what they did wrong and fix it for themselves instead of the older, cryptic and extremely unhelpful error message. | Frederick Muriuki Muriithi |
| 2024-01-15 | Update imports: `take` was moved to different package. | Frederick Muriuki Muriithi |
| 2023-12-20 | Fix ID column key...Fix the wrong assumption that the ID key will always be "ProbeSetID". The key for the ID column could change from study to study or dataset to dataset. | Frederick Muriuki Muriithi |
| 2023-11-30 | Bug: Fix insertion error...Fix a bug that was causing the data insertion to fail. | Frederick Muriuki Muriithi |
| 2023-11-30 | Fix errors caught by pylint and mypy. | Frederick Muriuki Muriithi |
| 2023-11-15 | Log out DB errors even when handled...Log out any DB errors that occur to help with tracking and debugging failures. | Frederick Muriuki Muriithi |
| 2023-11-15 | Remove debugging statement. | Frederick Muriuki Muriithi |
| 2023-11-15 | Bug: Insert ProbeSets before average data and cross-refs...Insert the ProbeSets first before inserting the average data and cross-referencing it. | Frederick Muriuki Muriithi |
| 2023-11-15 | mypy: Fix typing errors. | Frederick Muriuki Muriithi |
| 2023-11-15 | Linting: Fix linting errors. | Frederick Muriuki Muriithi |
| 2023-10-30 | Prevent overwrite. Avoid inserting same probeset multiple times....* Avoid overwriting existing data by adding a random string to the name of the ProbeSet * Read ProbeSet names separately from the means for the strains, to avoid entering the same ProbeSet record over and over with varying names. | Frederick Muriuki Muriithi |
| 2023-10-18 | Link to `ProbeSet.Id` in XRef Table...The "ProbeSetId" value in the file is actually stored in the database in the `ProbeSet.Name` field, whereas the `ProbeSetXRef` table actually uses the `ProbeSet.Id` value to define the relationships. This commit fixes that issue. | Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: Insert ProbeSets if they do not exist. | Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: Provide the platform_id to `insert_means` | Frederick Muriuki Muriithi |
| 2023-10-16 | Fix bug: parsing fields from query. | Frederick Muriuki Muriithi |
| 2022-08-05 | Update job status. Display stdout and stderr outputs...* Display the status of the job, as it is running * Display STDERR output if an error occurs * Display STDOUT output as job is running and on successful completion of the job | Frederick Muriuki Muriithi |
| 2022-08-04 | Format queries for output. Get rid of extraneous output. | Frederick Muriuki Muriithi |
| 2022-07-19 | Save standard error data. Fix linting and typing errors. | Frederick Muriuki Muriithi |
| 2022-07-19 | Implement data insertion (averages/means)...* quality_control/file_utils.py (new file): extract common file utilities. * quality_control/parsing.py (refactor): extract common file utilities. * scripts/insert_data.py: Implement data insertion for averages/means | Frederick Muriuki Muriithi |
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index : gn-uploader | |
| gn-uploader: Data uploader for GeneNetwork |
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