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gn-uploader: Data uploader for GeneNetwork
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2024-04-05
Add explicit route for favicon to reduce noise in the logs.
Frederick Muriuki Muriithi
2024-03-29
Add UI to select/create tissue.
Frederick Muriuki Muriithi
2024-03-20
Use `url_for` to get icon.
Frederick Muriuki Muriithi
2024-03-19
Set up application logging.
Frederick Muriuki Muriithi
2024-03-19
Add debugging statements to track upload of R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-03-19
Query by `Id` rather than `ProbeFreezeId`
Frederick Muriuki Muriithi
2024-03-15
Move defaults settings into qc_app module.
Frederick Muriuki Muriithi
2024-03-12
Build up correct path to default settings
Frederick Muriuki Muriithi
2024-03-04
Use `Id` rather than `ProbeFreezeId`.
Frederick Muriuki Muriithi
2024-03-04
Display flash messages correctly.
Frederick Muriuki Muriithi
2024-02-28
Remove last vestiges of flask's "instance path" configurations.
Frederick Muriuki Muriithi
2024-02-27
Remove use of instance path in configurations.
Frederick Muriuki Muriithi
2024-02-15
Refactor checking for user input errors.
Frederick Muriuki Muriithi
2024-02-15
Verify that the file actually exist
Frederick Muriuki Muriithi
2024-02-15
Provide only the file name, not full path.
Frederick Muriuki Muriithi
2024-02-15
Provide the log messages to the status page.
Frederick Muriuki Muriithi
2024-02-14
Provide endpoint to send data to.
Frederick Muriuki Muriithi
2024-02-14
Extract upload progress indication code
Frederick Muriuki Muriithi
2024-02-13
Provide nice UI progress indicators.
Frederick Muriuki Muriithi
2024-02-12
Check for errors in the 'phenose' file.
Frederick Muriuki Muriithi
2024-02-12
Check for errors in the 'pheno' file.
Frederick Muriuki Muriithi
2024-02-12
Improve error display for generic errors
Frederick Muriuki Muriithi
2024-02-12
Collect and display errors on 'geno' files in the bundle.
Frederick Muriuki Muriithi
2024-02-12
UI: Provide QC successful results page
Frederick Muriuki Muriithi
2024-02-12
Retrive and display generic bundle errors
Frederick Muriuki Muriithi
2024-02-12
Raise error if file is missing rather than returning a Union value.
Frederick Muriuki Muriithi
2024-02-12
R/qtl2 QC: Set up scaffolding for QC UI
Frederick Muriuki Muriithi
2024-02-07
ShortName is optional, remove check and set default
Frederick Muriuki Muriithi
2024-02-07
Prevent infinite redirect.
Frederick Muriuki Muriithi
2024-02-07
Fix error display: setup correct error class
Frederick Muriuki Muriithi
2024-02-07
Set up limits for inputs in UI
Frederick Muriuki Muriithi
2024-02-06
Bug: Fix routing issues
Frederick Muriuki Muriithi
2024-02-05
Run QC on the 'geno' file in R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-02-05
Fix linting and type errors.
Frederick Muriuki Muriithi
2024-02-05
Do general bundle validation and show errors
Frederick Muriuki Muriithi
2024-02-05
Update UI documentation
Frederick Muriuki Muriithi
2024-02-02
Bug: Specify DictCursor class to return dict-like result
Frederick Muriuki Muriithi
2024-01-24
Checks: Update code and tests to ensure all checks pass.
Frederick Muriuki Muriithi
2024-01-24
redis-prefix: update "upload samples" path
Frederick Muriuki Muriithi
2024-01-24
redis-prefix: Update "insert data" path.
Frederick Muriuki Muriithi
2024-01-24
redis-prefix: Update file validation code
Frederick Muriuki Muriithi
2024-01-23
Update scripts to use redis prefix.
Frederick Muriuki Muriithi
2024-01-23
Add prefix to redis keys
Frederick Muriuki Muriithi
2024-01-22
UI: Fix some UI bugs.
Frederick Muriuki Muriithi
2024-01-22
scripts: Pass in logger to get detailed updates.
Frederick Muriuki Muriithi
2024-01-22
UI: Show progress of R/qtl2 bundle processing.
Frederick Muriuki Muriithi
2024-01-20
Fetch sample/case names from database
Frederick Muriuki Muriithi
2024-01-19
scripts: Process R/qtl2 bundle
Frederick Muriuki Muriithi
2024-01-19
UI: Present entry point for R/qtl2 bundles upload.
Frederick Muriuki Muriithi
2024-01-18
UI: Display summary information.
Frederick Muriuki Muriithi
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