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gn-uploader: Data uploader for GeneNetwork
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rqtl2.py
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2024-06-27
Handle chunks on backend and update UI with progress
Frederick Muriuki Muriithi
2024-04-12
Provide more relevant error message.
Frederick Muriuki Muriithi
2024-04-12
Add missing return.
Frederick Muriuki Muriithi
2024-04-12
Consistently check for possibly non-existent data
Frederick Muriuki Muriithi
2024-04-12
Provide tissue-id details to probeset dataset templates
Frederick Muriuki Muriithi
2024-04-08
Add logging for IntegrityError
Frederick Muriuki Muriithi
2024-04-08
Refactor: Make error-checking more robust
Frederick Muriuki Muriithi
2024-04-08
Fix pylint and mypy errors.
Frederick Muriuki Muriithi
2024-04-08
bug: UI: Provide better error messaging.
Frederick Muriuki Muriithi
2024-04-08
bug: Handle IntegrityError: Studies cannot have same name.
Frederick Muriuki Muriithi
2024-04-08
bug: Check that Genotype dataset name is not duplicated.
Frederick Muriuki Muriithi
2024-04-05
Handle exceptions creating ProbeSet datasets.
Frederick Muriuki Muriithi
2024-03-29
Add UI to select/create tissue.
Frederick Muriuki Muriithi
2024-03-19
Add debugging statements to track upload of R/qtl2 bundle.
Frederick Muriuki Muriithi
2024-02-15
Refactor checking for user input errors.
Frederick Muriuki Muriithi
2024-02-15
Verify that the file actually exist
Frederick Muriuki Muriithi
2024-02-15
Provide only the file name, not full path.
Frederick Muriuki Muriithi
2024-02-15
Provide the log messages to the status page.
Frederick Muriuki Muriithi
2024-02-13
Provide nice UI progress indicators.
Frederick Muriuki Muriithi
2024-02-12
Check for errors in the 'phenose' file.
Frederick Muriuki Muriithi
2024-02-12
Collect and display errors on 'geno' files in the bundle.
Frederick Muriuki Muriithi
2024-02-12
UI: Provide QC successful results page
Frederick Muriuki Muriithi
2024-02-12
Retrive and display generic bundle errors
Frederick Muriuki Muriithi
2024-02-12
Raise error if file is missing rather than returning a Union value.
Frederick Muriuki Muriithi
2024-02-12
R/qtl2 QC: Set up scaffolding for QC UI
Frederick Muriuki Muriithi
2024-02-07
ShortName is optional, remove check and set default
Frederick Muriuki Muriithi
2024-02-07
Prevent infinite redirect.
Frederick Muriuki Muriithi
2024-02-07
Fix error display: setup correct error class
Frederick Muriuki Muriithi
2024-02-06
Bug: Fix routing issues
Frederick Muriuki Muriithi
2024-02-05
Fix linting and type errors.
Frederick Muriuki Muriithi
2024-02-05
Do general bundle validation and show errors
Frederick Muriuki Muriithi
2024-01-23
Update scripts to use redis prefix.
Frederick Muriuki Muriithi
2024-01-22
scripts: Pass in logger to get detailed updates.
Frederick Muriuki Muriithi
2024-01-22
UI: Show progress of R/qtl2 bundle processing.
Frederick Muriuki Muriithi
2024-01-19
scripts: Process R/qtl2 bundle
Frederick Muriuki Muriithi
2024-01-18
UI: Display summary information.
Frederick Muriuki Muriithi
2024-01-18
UI: Create new ProbeSet dataset.
Frederick Muriuki Muriithi
2024-01-18
UI: Select from existing ProbeSet datasets.
Frederick Muriuki Muriithi
2024-01-18
Create new ProbeSet study.
Frederick Muriuki Muriithi
2024-01-17
UI: Select ProbeSet study.
Frederick Muriuki Muriithi
2024-01-17
UI: Implement creating new genotype datasets.
Frederick Muriuki Muriithi
2024-01-17
UI: Initialise summary page.
Frederick Muriuki Muriithi
2024-01-17
Enable selecting from existing genotype datasets.
Frederick Muriuki Muriithi
2024-01-17
Update flash-messages' categories.
Frederick Muriuki Muriithi
2024-01-16
UI: Create UI for creating a new Genotype dataset.
Frederick Muriuki Muriithi
2024-01-16
UI: Create UI to select from existing genotype datasets.
Frederick Muriuki Muriithi
2024-01-16
Create intermediate step
Frederick Muriuki Muriithi
2024-01-08
Fix errors with types.
Frederick Muriuki Muriithi
2024-01-08
Upload R/qtl2 zip bundle and check for errors.
Frederick Muriuki Muriithi
2024-01-08
Implement "create-population" route.
Frederick Muriuki Muriithi
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