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gn-uploader: Data uploader for GeneNetwork
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2025-04-25
Fix display of upload errors for samples
Frederick Muriuki Muriithi
2025-04-25
Handle exceptions explicitly
Frederick Muriuki Muriithi
2025-04-21
Update the previews, in the case where resumables exist.
Frederick Muriuki Muriithi
2025-04-21
Improve check for file existence.
Frederick Muriuki Muriithi
2025-04-21
Associate each preview table with appropriate resumable object.
Frederick Muriuki Muriithi
2025-04-21
Update to bootstrap 5 classes.
Frederick Muriuki Muriithi
2025-04-21
Proceed to jobs status update page.
Frederick Muriuki Muriithi
2025-04-21
Implement rudimentary status update page for background jobs.
Frederick Muriuki Muriithi
2025-04-21
Use module-specific logger.
Frederick Muriuki Muriithi
2025-04-21
Add "DataId" to top-level trait details.
Frederick Muriuki Muriithi
2025-04-14
Setup module-level loggers.
Frederick Muriuki Muriithi
2025-04-14
Compute data differences in the script.
Frederick Muriuki Muriithi
2025-04-14
Convert values to float where present.
Frederick Muriuki Muriithi
2025-04-14
Fix typo.
Frederick Muriuki Muriithi
2025-04-14
Move common fieldnames into exportable variable.
Frederick Muriuki Muriithi
2025-04-14
Implement difference computations.
Frederick Muriuki Muriithi
2025-04-14
Add tests for new difference computation function.
Frederick Muriuki Muriithi
2025-04-14
Convert PubMed ID to int.
Frederick Muriuki Muriithi
2025-04-14
Move test to appropriate package.
Frederick Muriuki Muriithi
2025-04-14
Move difference computation to `run()` function.
Frederick Muriuki Muriithi
2025-04-14
Update existing linked publication(s) rather than creating new.
Frederick Muriuki Muriithi
2025-04-14
Log out job command for easier debug.
Frederick Muriuki Muriithi
2025-04-14
Provide species, population and dataset identifiers as job metadata.
Frederick Muriuki Muriithi
2025-04-14
Compute new PubMed IDs.
Frederick Muriuki Muriithi
2025-04-14
Update imports.
Frederick Muriuki Muriithi
2025-04-14
Return created objects with their IDs
Frederick Muriuki Muriithi
2025-04-14
Add types for connection objects.
Frederick Muriuki Muriithi
2025-04-14
Compute differences with tested function.
Frederick Muriuki Muriithi
2025-04-14
Implement computation for publication differences.
Frederick Muriuki Muriithi
2025-04-14
Move code to save new publications to database.
Frederick Muriuki Muriithi
2025-04-14
Rename test module.
Frederick Muriuki Muriithi
2025-04-11
Fix bug: Provide empty defaults, and fix type.
Frederick Muriuki Muriithi
2025-04-11
Move code to fetch phenotype publications from DB to publications package.
Frederick Muriuki Muriithi
2025-04-11
Move code to fetch publications from pubmed to publications module.
Frederick Muriuki Muriithi
2025-04-11
Write test for computing differences for publications in bulk edits.
Frederick Muriuki Muriithi
2025-04-11
Setup client for use with tests.
Frederick Muriuki Muriithi
2025-04-11
Update application initialisation to allow config updates for tests.
Frederick Muriuki Muriithi
2025-04-09
Convert PubMed_ID value from file to int
Frederick Muriuki Muriithi
2025-04-09
Compute publications differences.
Frederick Muriuki Muriithi
2025-04-09
Save new publications retrieved from NCBI's PubMed database.
Frederick Muriuki Muriithi
2025-04-09
Retrieve publication information from NCBI.
Frederick Muriuki Muriithi
2025-04-09
Use class from Bootstrap5 for hiding elements.
Frederick Muriuki Muriithi
2025-04-09
Fix typo.
Frederick Muriuki Muriithi
2025-04-09
Check whether there are new PubMed IDs before beginning the fetch.
Frederick Muriuki Muriithi
2025-04-05
Don't clear anonymous sessions with every check for login.
Frederick Muriuki Muriithi
2025-04-05
Add base "alert" class for alerts for bootstrap 5.
Frederick Muriuki Muriithi
2025-04-05
Fix fetching of user details.
Frederick Muriuki Muriithi
2025-04-05
Set "logged_in" key together with the token.
Frederick Muriuki Muriithi
2025-04-05
Override only the user details provided rather than the entire object.
Frederick Muriuki Muriithi
2025-03-26
Pass PubMed IDs from the file to difference computation function.
Frederick Muriuki Muriithi
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