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2024-12-20Provide URI for the POST endpoint for chunked uploads.Frederick Muriuki Muriithi
2024-12-20Add javascript to handle resumable, chunked file uploads.Frederick Muriuki Muriithi
2024-12-20Provide initial endpoints for chunked file uploads.Frederick Muriuki Muriithi
2024-12-20Retain a consistent naming scheme for functions.Frederick Muriuki Muriithi
* Create a temporary fix to bridge the change.
2024-12-20Separate generic functions from chunking functionsFrederick Muriuki Muriithi
2024-12-19Make files into a module of its own.Frederick Muriuki Muriithi
2024-12-17Handle non-existent values correctly.Frederick Muriuki Muriithi
2024-12-17Update the previews on changing values and/or files.Frederick Muriuki Muriithi
2024-12-17Trigger 'change' event on resetting value(s) to default.Frederick Muriuki Muriithi
2024-12-17Import files.js to get access to 'read_first_n_lines' function.Frederick Muriuki Muriithi
2024-12-17Add function to read first 'n' lines of file as text.Frederick Muriuki Muriithi
2024-12-17Add function to update a preview table.Frederick Muriuki Muriithi
2024-12-17Display preview UI elements.Frederick Muriuki Muriithi
2024-12-17Add template for tables to preview files' parsing.Frederick Muriuki Muriithi
2024-12-17Move common sidebar contentFrederick Muriuki Muriithi
2024-12-16Use January as default monthFrederick Muriuki Muriithi
Sometimes, the publication date only contains the year.
2024-12-16Handle error conditionsFrederick Muriuki Muriithi
* Only fetch abstract details if the summary is successful * Indicate error if fetching summary fails
2024-12-13Separate bundle and individual files processingFrederick Muriuki Muriithi
Move the code processing the R/qtl2 bundle into a separate function and call it. Create a new (currently, failing) function to process the individual files.
2024-12-13Refactor template to extend common baseFrederick Muriuki Muriithi
Extend the common base template in order to reuse the common parts for uploading phenotypes.
2024-12-13Allow choice between the two UI optionsFrederick Muriuki Muriithi
Allow the user to switch between using the R/qtl2 file format or uploading the individual files.
2024-12-13Use new templates:Frederick Muriuki Muriithi
2024-12-13Rename templateFrederick Muriuki Muriithi
Rename original template to indicate it uses the R/qtl2 bundle format.
2024-12-13Add page documentation.Frederick Muriuki Muriithi
2024-12-13Prompt for the files.Frederick Muriuki Muriithi
2024-12-13Prompt for file structure details.Frederick Muriuki Muriithi
2024-12-12Add incomple template for uploading individual files.Frederick Muriuki Muriithi
2024-12-12Create new base templates for upload of phenotype.Frederick Muriuki Muriithi
Implement the common UI features, for fetching publication details.
2024-12-12Update link text.Frederick Muriuki Muriithi
2024-12-10Add menu entry for platforms in "View Species" page.Frederick Muriuki Muriithi
2024-12-10Retain population for "List Markers" pageFrederick Muriuki Muriithi
For UI consistency, and as a convenience to the users, retain the population details for the "List Markers" page to help them navigate more easily using the breadcrumbs.
2024-12-10Reorder menus in the populations page.Frederick Muriuki Muriithi
Make the order of the menus a little closer to the likely order of data upload.
2024-12-10Deactivate access to incomplete/unimplemented features.Frederick Muriuki Muriithi
2024-12-10Redirect if there's only a single phenotype datasetFrederick Muriuki Muriithi
If a particular population has only a single phenotype dataset, redirect to the dataset view page rather than listing the only dataset.
2024-12-10Use specialised template renderer for phenotypes.Frederick Muriuki Muriithi
Use the specialised template renderer to keep the rendering consistent.
2024-12-10UI: Remove extraneous text in "View*" pages.Frederick Muriuki Muriithi
2024-12-10Improve breadcrumbsFrederick Muriuki Muriithi
Update the breadcrumb links such that each will lead back the parent section rather than to generic section pages. This is updated for the relevant parts of the UI.
2024-12-09Prevent user from continuing on error.Frederick Muriuki Muriithi
2024-12-09Prevent errors' table header from scrolling away.Frederick Muriuki Muriithi
2024-12-09Handle common typo likely to exist in control files.Frederick Muriuki Muriithi
2024-12-03Display the files metadata in progress section.Frederick Muriuki Muriithi
2024-12-03Retrieve job files metadata.Frederick Muriuki Muriithi
2024-12-03Fix some linting and mypy issues.Frederick Muriuki Muriithi
2024-12-03UI Styling: make table body text slightly smaller.Frederick Muriuki Muriithi
2024-12-03UI: Clip text that is too long.Frederick Muriuki Muriithi
2024-12-03Improve error textFrederick Muriuki Muriithi
Move the list to the end of the text to make it easier to clip text in the UI.
2024-12-03Update file metadata using a mappingFrederick Muriuki Muriithi
Update the metadata using a mapping rather than updating a field at a time to make it easier to ensure everything is updated in one go.
2024-12-03Provide consistent way to build file-specific fully-qualified keysFrederick Muriuki Muriithi
2024-12-03Improve UI: stdout/stderr outputFrederick Muriuki Muriithi
Add styling to section and limit the height of the content.
2024-12-03Display cell valueFrederick Muriuki Muriithi
Display the cell value to enable the user compare the error message to the actual value, in order to figure out how to fix the error(s).
2024-12-03Improve UI: Move if check out of tableFrederick Muriuki Muriithi
Create a new section for the errors display, and only display the table if there is at least one error.