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2024-01-04Process sex and cross information data in "covar" files.Frederick Muriuki Muriithi
2024-01-04Rename test moduleFrederick Muriuki Muriithi
2024-01-04Parse multiple files with same file key.Frederick Muriuki Muriithi
2024-01-04Test parsing of multiple files for single keyFrederick Muriuki Muriithi
2024-01-04Add tests for parsing cross information (covar) files.Frederick Muriuki Muriithi
2024-01-04Add tests for parsing 'phenocovar' files.Frederick Muriuki Muriithi
2024-01-04Rename test module.Frederick Muriuki Muriithi
2024-01-03Use generic parser. Remove obsoleted functions.Frederick Muriuki Muriithi
2024-01-03Parse founder_geno files. Generalise parsing files.Frederick Muriuki Muriithi
2024-01-03Add tests for `founder_geno` parsing.Frederick Muriuki Muriithi
2024-01-03Parse the phenotype data from the R/qtl2 bundle.Frederick Muriuki Muriithi
2024-01-03Rename argument and add documentation to functions.Frederick Muriuki Muriithi
2024-01-03Extract processing of transposed files into reusable function.Frederick Muriuki Muriithi
2024-01-03Refactor: Extract potentially reusable functionsFrederick Muriuki Muriithi
2024-01-02Inherit from `gnqc-py` in `guix-bioinformatics`.Frederick Muriuki Muriithi
2024-01-02Cleanup guix definitions in preparation for deployment.Frederick Muriuki Muriithi
2024-01-02Mark tests as unit tests.Frederick Muriuki Muriithi
2024-01-02Abstract away non-transposed file processingFrederick Muriuki Muriithi
2024-01-02Cleanup: Fix linting and typing errors and update docs.Frederick Muriuki Muriithi
2023-12-28Rework parsing of transposed geno files.Frederick Muriuki Muriithi
2023-12-28Handle transposed geno files.Frederick Muriuki Muriithi
2023-12-27Tests: Test parsing of non-transposed geno files.Frederick Muriuki Muriithi
2023-12-27Tests: Test parsing of pmap files. Merge testing of map files.Frederick Muriuki Muriithi
2023-12-27Tests: Add tests for parsing gmap files.Frederick Muriuki Muriithi
2023-12-25Generalise to read both genetic and physical maps.Frederick Muriuki Muriithi
2023-12-25Read genetic map filesFrederick Muriuki Muriithi
2023-12-20Read genotype filesFrederick Muriuki Muriithi
2023-12-20Read R/qtl2 format filesFrederick Muriuki Muriithi
2023-12-20Add `pyyaml` as a dependency.Frederick Muriuki Muriithi
2023-12-20Provide instance_path at client creation.Frederick Muriuki Muriithi
2023-12-20Stop relying on "GUIX_ENVIRONMENT" envvarFrederick Muriuki Muriithi
2023-12-20Reduce table columnsFrederick Muriuki Muriithi
2023-12-20Fix ID column keyFrederick Muriuki Muriithi
2023-12-20Add faviconFrederick Muriuki Muriithi
2023-12-19Commit missing templates.Frederick Muriuki Muriithi
2023-12-19Bug: Commit population before trying to upload data.Frederick Muriuki Muriithi
2023-12-18Samples: Hook-up external async script to upload the samples.Frederick Muriuki Muriithi
2023-12-14samples: Create external script and fix some bugs.Frederick Muriuki Muriithi
2023-12-14Pass connection to `species_by_id` function.Frederick Muriuki Muriithi
2023-12-11samples: Fix bugs in code saving samples to dbFrederick Muriuki Muriithi
2023-12-07Samples: Read an save data to db.Frederick Muriuki Muriithi
2023-12-07Samples: Provide preview feature.Frederick Muriuki Muriithi
2023-12-06Feature: Upload Samples/CasesFrederick Muriuki Muriithi
2023-11-30Remove link to non-existent file.Frederick Muriuki Muriithi
2023-11-30Error logging: Add more details to help with debugging.Frederick Muriuki Muriithi
2023-11-30Bug: Fix insertion errorFrederick Muriuki Muriithi
2023-11-30Handle duplicate dataset creation errorFrederick Muriuki Muriithi
2023-11-30Fix errors caught by pylint and mypy.Frederick Muriuki Muriithi
2023-11-28Handle generic MySQL errors at the top-level.Frederick Muriuki Muriithi
2023-11-28Capture, log and handle generic exceptionsFrederick Muriuki Muriithi
generated by cgit v1.2.3 (git 2.25.4) at 2024-07-04 22:40:59 +0000