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gn-uploader: Data uploader for GeneNetwork
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Author
12 days
Add incomple template for uploading individual files.
Frederick Muriuki Muriithi
12 days
Create new base templates for upload of phenotype.
Frederick Muriuki Muriithi
12 days
Update link text.
Frederick Muriuki Muriithi
14 days
Add menu entry for platforms in "View Species" page.
Frederick Muriuki Muriithi
14 days
Retain population for "List Markers" page
Frederick Muriuki Muriithi
14 days
Reorder menus in the populations page.
Frederick Muriuki Muriithi
14 days
Deactivate access to incomplete/unimplemented features.
Frederick Muriuki Muriithi
14 days
Redirect if there's only a single phenotype dataset
Frederick Muriuki Muriithi
14 days
Use specialised template renderer for phenotypes.
Frederick Muriuki Muriithi
14 days
UI: Remove extraneous text in "View*" pages.
Frederick Muriuki Muriithi
14 days
Improve breadcrumbs
Frederick Muriuki Muriithi
2024-12-09
Prevent user from continuing on error.
Frederick Muriuki Muriithi
2024-12-09
Prevent errors' table header from scrolling away.
Frederick Muriuki Muriithi
2024-12-09
Handle common typo likely to exist in control files.
Frederick Muriuki Muriithi
2024-12-03
Display the files metadata in progress section.
Frederick Muriuki Muriithi
2024-12-03
Retrieve job files metadata.
Frederick Muriuki Muriithi
2024-12-03
Fix some linting and mypy issues.
Frederick Muriuki Muriithi
2024-12-03
UI Styling: make table body text slightly smaller.
Frederick Muriuki Muriithi
2024-12-03
UI: Clip text that is too long.
Frederick Muriuki Muriithi
2024-12-03
Improve error text
Frederick Muriuki Muriithi
2024-12-03
Update file metadata using a mapping
Frederick Muriuki Muriithi
2024-12-03
Provide consistent way to build file-specific fully-qualified keys
Frederick Muriuki Muriithi
2024-12-03
Improve UI: stdout/stderr output
Frederick Muriuki Muriithi
2024-12-03
Display cell value
Frederick Muriuki Muriithi
2024-12-03
Improve UI: Move if check out of table
Frederick Muriuki Muriithi
2024-12-03
Enable limiting of number of errors to fetch.
Frederick Muriuki Muriithi
2024-12-03
Save 'pheno' errors in redis as they are found.
Frederick Muriuki Muriithi
2024-12-03
Add some phenocovar metadata.
Frederick Muriuki Muriithi
2024-12-03
Fetch a jobs errors from its errors lists.
Frederick Muriuki Muriithi
2024-12-03
Save phenocovar errors in redis as they are found.
Frederick Muriuki Muriithi
2024-12-03
Pass the redis connection and fully qualified job id
Frederick Muriuki Muriithi
2024-12-03
Cleanup linting and type (mypy) errors.
Frederick Muriuki Muriithi
2024-12-03
Wrap everything in try-catch to handle errors gracefully.
Frederick Muriuki Muriithi
2024-12-02
Add emphasis to important point.
Frederick Muriuki Muriithi
2024-12-02
Fix typo.
Frederick Muriuki Muriithi
2024-12-02
Send logs to STDOUT too.
Frederick Muriuki Muriithi
2024-12-02
Launch job and redirect to job status page.
Frederick Muriuki Muriithi
2024-12-02
Add UI to view status of the job as it runs.
Frederick Muriuki Muriithi
2024-12-02
Return 0 on completion of QC processing.
Frederick Muriuki Muriithi
2024-12-02
Change from 'pending' to 'started' on entry to script.
Frederick Muriuki Muriithi
2024-11-22
Remove local code that does db connection.
Frederick Muriuki Muriithi
2024-11-22
Use gn-libs code for db connection.
Frederick Muriuki Muriithi
2024-11-22
Add gn-libs as a dependency.
Frederick Muriuki Muriithi
2024-10-24
Reduce number of local variables created in function.
Frederick Muriuki Muriithi
2024-10-24
Add `jobid` to extraction directory
Frederick Muriuki Muriithi
2024-10-24
Check pheno, phenose, and phenonum files with logging
Frederick Muriuki Muriithi
2024-10-24
Check phenocovar files with logging
Frederick Muriuki Muriithi
2024-10-24
Fix linting and typing errors.
Frederick Muriuki Muriithi
2024-10-24
Add a `--loglevel` argument to select loglevel in scripts
Frederick Muriuki Muriithi
2024-10-24
Parse entire namespace object rather than individual values.
Frederick Muriuki Muriithi
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