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gn-uploader: Data uploader for GeneNetwork
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2024-09-03
Put populations under species: improve hierarchy.
Frederick Muriuki Muriithi
2024-09-03
Initialise the populations package and update references.
Frederick Muriuki Muriithi
2024-09-03
Extract common UI pattern to separate module for reusability.
Frederick Muriuki Muriithi
2024-09-03
Provide generic way to select species.
Frederick Muriuki Muriithi
2024-09-03
Provide UI for viewing species details.
Frederick Muriuki Muriithi
2024-09-03
Enable third level of breadcrumbs.
Frederick Muriuki Muriithi
2024-09-03
Update species queries
Frederick Muriuki Muriithi
2024-09-03
Save a species to the database.
Frederick Muriuki Muriithi
2024-09-03
Put active pages behind auth. Flash all error messages.
Frederick Muriuki Muriithi
2024-08-30
Initialise package for dealing with Species.
Frederick Muriuki Muriithi
2024-08-28
Fix imports, and minor bugs.
Frederick Muriuki Muriithi
2024-08-28
Move code handling expression data upload into new module.
Frederick Muriuki Muriithi
2024-08-28
Rework UI: present menus on the left, content on the right.
Frederick Muriuki Muriithi
2024-08-16
Log out correct parameters.
Frederick Muriuki Muriithi
2024-08-13
Bug: cross reference with NULL cM when "gmap" file is absent
Frederick Muriuki Muriithi
2024-08-12
Bug: Ensure file type values are lists.
Frederick Muriuki Muriithi
2024-08-12
Update check for missing files: Check from directory.
Frederick Muriuki Muriithi
2024-08-12
Add utility to transpose CSVs, renaming the original file.
Frederick Muriuki Muriithi
2024-08-12
Define new InvalidValue error type.
Frederick Muriuki Muriithi
2024-08-12
Rename module: Module contains exceptions classes.
Frederick Muriuki Muriithi
2024-08-09
Read R/qtl2 control data from a directory with extracted files.
Frederick Muriuki Muriithi
2024-08-08
Function to transpose CSV files.
Frederick Muriuki Muriithi
2024-08-08
Add utility function to extract R/qtl2 zip bundles
Frederick Muriuki Muriithi
2024-08-08
Fix linting issues.
Frederick Muriuki Muriithi
2024-08-08
Fix bugs and pass in logger to functions.
Frederick Muriuki Muriithi
2024-08-08
Set up logging for the application.
Frederick Muriuki Muriithi
2024-08-07
Update installer manifest.
Frederick Muriuki Muriithi
2024-08-07
Make passing SQL_URI to `database_connection` mandatory.
Frederick Muriuki Muriithi
2024-08-06
Pass logger on to inner functions
Frederick Muriuki Muriithi
2024-08-06
Override `client_secret_post`: use JSON
Frederick Muriuki Muriithi
2024-08-06
Avoid hitting auth server to check for token
Frederick Muriuki Muriithi
2024-08-05
Fix token revocation
Frederick Muriuki Muriithi
2024-08-05
Display the stack trace correctly on the template.
Frederick Muriuki Muriithi
2024-08-05
If no user is logged in, notify and redirect appropriately.
Frederick Muriuki Muriithi
2024-08-05
Provide a generalised way to handle errors and exceptions.
Frederick Muriuki Muriithi
2024-08-05
Put endpoints behind an authorisation check
Frederick Muriuki Muriithi
2024-08-05
mypy and pylint fixes.
Frederick Muriuki Muriithi
2024-08-05
Enable logout.
Frederick Muriuki Muriithi
2024-08-05
Differentiate python's requests library from our monadic wrappers.
Frederick Muriuki Muriithi
2024-08-05
Fix bugs in POST wrapper for OAuth2 client
Frederick Muriuki Muriithi
2024-08-05
Add OAuth2/JWK-related endpoints.
Frederick Muriuki Muriithi
2024-07-26
Add module to handle the JSON Web Keys.
Frederick Muriuki Muriithi
2024-07-26
Add wrappers for OAuth2Session's `get` and `post` methods. Fix bugs.
Frederick Muriuki Muriithi
2024-07-26
Provide UI for enabling login to the application.
Frederick Muriuki Muriithi
2024-07-26
Initialise sessions for the application.
Frederick Muriuki Muriithi
2024-07-26
Rename configuration variable
Frederick Muriuki Muriithi
2024-07-26
Setup secrets from config file.
Frederick Muriuki Muriithi
2024-07-26
authorisation module: utilities for basic authorisation.
Frederick Muriuki Muriithi
2024-07-26
OAuth2 package: Handle OAuth2 related issues
Frederick Muriuki Muriithi
2024-07-26
Add monadic wrapper for requests library.
Frederick Muriuki Muriithi
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