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AgeCommit message (Expand)Author
2024-04-10linting: Fix linting errors.Frederick Muriuki Muriithi
2024-04-10logging: Set up logging in wsgi.pyFrederick Muriuki Muriithi
2024-04-10Gracefully handle all `werkzeug.exceptions` errors.Frederick Muriuki Muriithi
2024-04-10Use application logger, not root logger.Frederick Muriuki Muriithi
2024-04-08Add logging for IntegrityErrorFrederick Muriuki Muriithi
2024-04-08Refactor: Make error-checking more robustFrederick Muriuki Muriithi
2024-04-08Fix issues caught by integration tests.Frederick Muriuki Muriithi
2024-04-08Fix pylint and mypy errors.Frederick Muriuki Muriithi
2024-04-08bug: UI: Provide better error messaging.Frederick Muriuki Muriithi
2024-04-08bug: Handle IntegrityError: Studies cannot have same name.Frederick Muriuki Muriithi
2024-04-08bug: Check that Genotype dataset name is not duplicated.Frederick Muriuki Muriithi
2024-04-05Handle exceptions creating ProbeSet datasets.Frederick Muriuki Muriithi
2024-04-05Add explicit route for favicon to reduce noise in the logs.Frederick Muriuki Muriithi
2024-04-04Remove unused database connection.Frederick Muriuki Muriithi
2024-04-03Reduce size of data inserted per queryFrederick Muriuki Muriithi
2024-03-29Quiet linter.Frederick Muriuki Muriithi
2024-03-29Add UI to select/create tissue.Frederick Muriuki Muriithi
2024-03-22Notify user if identifiers are not consistent.Frederick Muriuki Muriithi
2024-03-22Map names in files to names in database.Frederick Muriuki Muriithi
2024-03-22Fix linting issue.Frederick Muriuki Muriithi
2024-03-21Improve channel definition documentation.Frederick Muriuki Muriithi
2024-03-20Use `url_for` to get icon.Frederick Muriuki Muriithi
2024-03-20Fix bug: correctly merge standard-error values in file to data in dbFrederick Muriuki Muriithi
2024-03-19Set up application logging.Frederick Muriuki Muriithi
2024-03-19Add debugging statements to track upload of R/qtl2 bundle.Frederick Muriuki Muriithi
2024-03-19Query by `Id` rather than `ProbeFreezeId`Frederick Muriuki Muriithi
2024-03-15Move defaults settings into qc_app module.Frederick Muriuki Muriithi
2024-03-14Update symbolic linkFrederick Muriuki Muriithi
2024-03-12Build up correct path to default settingsFrederick Muriuki Muriithi
2024-03-11Rename moduleFrederick Muriuki Muriithi
2024-03-11Fix package name: gnqc-py to gn-uploaderFrederick Muriuki Muriithi
2024-03-11Add guix-past as a channel dependencyFrederick Muriuki Muriithi
2024-03-11Make guix-bioinformatics a dependency for this channel.Frederick Muriuki Muriithi
2024-03-08Update packaging and distribution declarations.Frederick Muriuki Muriithi
2024-03-08Rename package for guixFrederick Muriuki Muriithi
2024-03-04Use `Id` rather than `ProbeFreezeId`.Frederick Muriuki Muriithi
2024-03-04Display flash messages correctly.Frederick Muriuki Muriithi
2024-02-28tests: test with just the message - don't include markupFrederick Muriuki Muriithi
2024-02-28tests: Update unit tests: remove use of obsoleted functions.Frederick Muriuki Muriithi
2024-02-28Remove last vestiges of flask's "instance path" configurations.Frederick Muriuki Muriithi
2024-02-28Fix bug: fetch from cursor, not return from cursor.execute(…)load-raw-data-no-parsingFrederick Muriuki Muriithi
2024-02-27Remove use of instance path in configurations.Frederick Muriuki Muriithi
2024-02-21Check that samples/cases are consistentFrederick Muriuki Muriithi
2024-02-21Pass 'filename' value to error checker function.Frederick Muriuki Muriithi
2024-02-20Track filename in the errorsFrederick Muriuki Muriithi
2024-02-20Generalise fetching of samples/cases/individuals.Frederick Muriuki Muriithi
2024-02-20Read samples from geno file.Frederick Muriuki Muriithi
2024-02-20Read each file separatelyFrederick Muriuki Muriithi
2024-02-20Stand-alone function to read control fileFrederick Muriuki Muriithi
2024-02-16Replace genotype codes with values in control file.Frederick Muriuki Muriithi